Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PRELID1P1-202ENST00000567272 903 ntBASIC18.66■□□□□ 0.58
RFWD3Q6PCD5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.66■□□□□ 0.58
RFWD3Q6PCD5 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.66■□□□□ 0.58
RFWD3Q6PCD5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.66■□□□□ 0.58
RFWD3Q6PCD5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD3Q6PCD5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD3Q6PCD5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD3Q6PCD5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RFWD3Q6PCD5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD3Q6PCD5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD3Q6PCD5 AC132938.6-201ENST00000623828 1655 ntBASIC18.66■□□□□ 0.58
RFWD3Q6PCD5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFWD3Q6PCD5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 AC135776.1-201ENST00000319817 2481 ntBASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 AC068472.1-201ENST00000474589 881 ntBASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 KRT126P-201ENST00000549467 1181 ntBASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 AC074051.2-201ENST00000565115 352 ntBASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFWD3Q6PCD5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RFWD3Q6PCD5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
RFWD3Q6PCD5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
RFWD3Q6PCD5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.64■□□□□ 0.58
RFWD3Q6PCD5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.64■□□□□ 0.58
RFWD3Q6PCD5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 AC012615.1-201ENST00000565797 1299 ntBASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 AC011840.4-201ENST00000578471 627 ntBASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFWD3Q6PCD5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 AC104819.1-201ENST00000504587 486 ntBASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 Z69720.1-201ENST00000601483 472 ntBASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.63■□□□□ 0.57
RFWD3Q6PCD5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms