Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.66■□□□□ 0.58
TPGS2Q68CL5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.66■□□□□ 0.58
TPGS2Q68CL5 AC034105.1-201ENST00000563488 319 ntBASIC18.66■□□□□ 0.58
TPGS2Q68CL5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.66■□□□□ 0.58
TPGS2Q68CL5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.66■□□□□ 0.58
TPGS2Q68CL5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPGS2Q68CL5 AC006557.2-201ENST00000592985 1240 ntBASIC18.66■□□□□ 0.58
TPGS2Q68CL5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPGS2Q68CL5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TPGS2Q68CL5 FAM197Y3-203ENST00000618346 717 ntBASIC18.66■□□□□ 0.58
TPGS2Q68CL5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPGS2Q68CL5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPGS2Q68CL5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TPGS2Q68CL5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPGS2Q68CL5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPGS2Q68CL5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPGS2Q68CL5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TPGS2Q68CL5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPGS2Q68CL5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 DDX43P3-201ENST00000441064 443 ntBASIC18.65■□□□□ 0.58
TPGS2Q68CL5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 PGM5P2-202ENST00000637225 1043 ntBASIC18.65■□□□□ 0.58
TPGS2Q68CL5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 AC135776.1-201ENST00000319817 2481 ntBASIC18.65■□□□□ 0.58
TPGS2Q68CL5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TPGS2Q68CL5 AP002414.3-201ENST00000589352 1468 ntBASIC18.65■□□□□ 0.58
TPGS2Q68CL5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TPGS2Q68CL5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TPGS2Q68CL5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
TPGS2Q68CL5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TPGS2Q68CL5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 SIRPAP1-201ENST00000448467 1770 ntBASIC18.64■□□□□ 0.57
TPGS2Q68CL5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 MIR940-201ENST00000401276 94 ntBASIC18.64■□□□□ 0.57
TPGS2Q68CL5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 KRT18P27-201ENST00000427733 1299 ntBASIC18.64■□□□□ 0.57
TPGS2Q68CL5 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 AL589182.2-201ENST00000619332 1049 ntBASIC18.64■□□□□ 0.57
TPGS2Q68CL5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 AL138781.2-201ENST00000617896 1843 ntBASIC18.64■□□□□ 0.57
TPGS2Q68CL5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 BX276092.7-203ENST00000637198 1536 ntBASIC18.64■□□□□ 0.57
TPGS2Q68CL5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPGS2Q68CL5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPGS2Q68CL5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.63■□□□□ 0.57
TPGS2Q68CL5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPGS2Q68CL5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.63■□□□□ 0.57
TPGS2Q68CL5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.63■□□□□ 0.57
TPGS2Q68CL5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPGS2Q68CL5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TPGS2Q68CL5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPGS2Q68CL5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPGS2Q68CL5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TPGS2Q68CL5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms