Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 MTCL1P1-201ENST00000446207 792 ntBASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 AL136038.3-201ENST00000561909 1096 ntBASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEF9Q5VWM5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 AL049597.2-201ENST00000565575 961 ntBASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF9Q5VWM5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 LINC00304-203ENST00000565008 1864 ntBASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 LINC01238-205ENST00000567549 1107 ntBASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 AC139713.2-201ENST00000641328 2723 ntBASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF9Q5VWM5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PRAMEF9Q5VWM5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF9Q5VWM5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 387.9 ms