Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 AC138761.1-201ENST00000584393 385 ntBASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 AC099522.2-201ENST00000607001 744 ntBASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 AC010654.1-201ENST00000615722 808 ntBASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13DQ5THJ4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 COX5BP2-201ENST00000392354 334 ntBASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 FAM185BP-201ENST00000443595 716 ntBASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 AC096734.2-201ENST00000562054 433 ntBASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 LINC00628-201ENST00000628516 1289 ntBASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 AC022145.2-201ENST00000598203 171 ntBASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 AC239800.4-201ENST00000603712 296 ntBASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 FUT8-AS1-201ENST00000621019 1521 ntBASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13DQ5THJ4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13DQ5THJ4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 AC008667.4-201ENST00000607370 168 ntBASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 AL121761.2-201ENST00000598007 1648 ntBASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13DQ5THJ4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms