Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 AP005482.1-201ENST00000563722 1273 ntBASIC9.68□□□□□ -0.86
UBR4Q5T4S7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 MED16-214ENST00000617672 554 ntTSL 5 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 AL353593.2-201ENST00000602529 1483 ntBASIC9.68□□□□□ -0.86
UBR4Q5T4S7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 AL135744.1-201ENST00000565098 629 ntBASIC9.68□□□□□ -0.86
UBR4Q5T4S7 CHCHD2P3-201ENST00000603038 451 ntBASIC9.68□□□□□ -0.86
UBR4Q5T4S7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 LINC00602-201ENST00000629776 2065 ntBASIC9.68□□□□□ -0.86
UBR4Q5T4S7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC9.68□□□□□ -0.86
UBR4Q5T4S7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 GNAQP1-201ENST00000444815 1067 ntBASIC9.67□□□□□ -0.86
UBR4Q5T4S7 AC079140.1-201ENST00000508039 487 ntBASIC9.67□□□□□ -0.86
UBR4Q5T4S7 AP001258.2-201ENST00000529891 490 ntBASIC9.67□□□□□ -0.86
UBR4Q5T4S7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 C2orf69P2-201ENST00000562032 1123 ntBASIC9.67□□□□□ -0.86
UBR4Q5T4S7 STK25P1-201ENST00000585406 838 ntBASIC9.67□□□□□ -0.86
UBR4Q5T4S7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC9.67□□□□□ -0.86
UBR4Q5T4S7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 ZNF815P-204ENST00000434898 1737 ntBASIC9.67□□□□□ -0.86
UBR4Q5T4S7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC9.67□□□□□ -0.86
UBR4Q5T4S7 AL138828.2-201ENST00000615812 383 ntBASIC9.67□□□□□ -0.86
UBR4Q5T4S7 CYP51A1P1-201ENST00000492267 1507 ntBASIC9.66□□□□□ -0.86
UBR4Q5T4S7 AC007225.1-201ENST00000566331 1836 ntBASIC9.66□□□□□ -0.86
UBR4Q5T4S7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 AC093004.1-201ENST00000508850 424 ntBASIC9.66□□□□□ -0.86
UBR4Q5T4S7 AC133552.6-201ENST00000613406 534 ntBASIC9.66□□□□□ -0.86
UBR4Q5T4S7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC9.66□□□□□ -0.86
UBR4Q5T4S7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms