Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 AL355075.4-201ENST00000554988 638 ntBASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 AL512604.3-201ENST00000569583 964 ntBASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 AC009949.1-201ENST00000623048 1830 ntBASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 AC099398.1-201ENST00000567919 2776 ntBASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.3
LRIF1Q5T3J3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
LRIF1Q5T3J3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LRIF1Q5T3J3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 DDX43P3-201ENST00000441064 443 ntBASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRIF1Q5T3J3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRIF1Q5T3J3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIF1Q5T3J3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIF1Q5T3J3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIF1Q5T3J3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIF1Q5T3J3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.87■□□□□ 0.29
LRIF1Q5T3J3 CYP2D8P-201ENST00000433633 1490 ntBASIC16.87■□□□□ 0.29
LRIF1Q5T3J3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.87■□□□□ 0.29
LRIF1Q5T3J3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRIF1Q5T3J3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.87■□□□□ 0.29
LRIF1Q5T3J3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIF1Q5T3J3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIF1Q5T3J3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIF1Q5T3J3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRIF1Q5T3J3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRIF1Q5T3J3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms