Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VARS2Q5ST30 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VARS2Q5ST30 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VARS2Q5ST30 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.91■□□□□ 0.62
VARS2Q5ST30 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARS2Q5ST30 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.91■□□□□ 0.62
VARS2Q5ST30 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARS2Q5ST30 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARS2Q5ST30 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VARS2Q5ST30 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VARS2Q5ST30 RPS2P28-201ENST00000314255 741 ntBASIC18.91■□□□□ 0.62
VARS2Q5ST30 MIR574-201ENST00000385209 96 ntBASIC18.91■□□□□ 0.62
VARS2Q5ST30 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
VARS2Q5ST30 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.91■□□□□ 0.62
VARS2Q5ST30 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.91■□□□□ 0.62
VARS2Q5ST30 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VARS2Q5ST30 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.91■□□□□ 0.62
VARS2Q5ST30 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.91■□□□□ 0.62
VARS2Q5ST30 NKAPP1-205ENST00000585790 367 ntBASIC18.91■□□□□ 0.62
VARS2Q5ST30 BNIP3P41-202ENST00000616656 861 ntBASIC18.91■□□□□ 0.62
VARS2Q5ST30 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARS2Q5ST30 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARS2Q5ST30 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARS2Q5ST30 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VARS2Q5ST30 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.91■□□□□ 0.62
VARS2Q5ST30 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARS2Q5ST30 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.91■□□□□ 0.62
VARS2Q5ST30 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARS2Q5ST30 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARS2Q5ST30 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.91■□□□□ 0.62
VARS2Q5ST30 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARS2Q5ST30 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARS2Q5ST30 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VARS2Q5ST30 AL138781.2-201ENST00000617896 1843 ntBASIC18.9■□□□□ 0.62
VARS2Q5ST30 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.9■□□□□ 0.62
VARS2Q5ST30 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VARS2Q5ST30 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VARS2Q5ST30 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.9■□□□□ 0.62
VARS2Q5ST30 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
VARS2Q5ST30 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
VARS2Q5ST30 AC025062.2-201ENST00000605477 670 ntBASIC18.9■□□□□ 0.62
VARS2Q5ST30 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.9■□□□□ 0.62
VARS2Q5ST30 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VARS2Q5ST30 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VARS2Q5ST30 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VARS2Q5ST30 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
VARS2Q5ST30 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
VARS2Q5ST30 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.9■□□□□ 0.62
VARS2Q5ST30 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VARS2Q5ST30 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
VARS2Q5ST30 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VARS2Q5ST30 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.62
VARS2Q5ST30 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.89■□□□□ 0.62
VARS2Q5ST30 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VARS2Q5ST30 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
VARS2Q5ST30 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.89■□□□□ 0.61
VARS2Q5ST30 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
VARS2Q5ST30 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
VARS2Q5ST30 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VARS2Q5ST30 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
VARS2Q5ST30 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
VARS2Q5ST30 MIR1233-2-201ENST00000408138 82 ntBASIC18.89■□□□□ 0.61
VARS2Q5ST30 MIR1233-1-201ENST00000408722 82 ntBASIC18.89■□□□□ 0.61
VARS2Q5ST30 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.89■□□□□ 0.61
VARS2Q5ST30 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC18.89■□□□□ 0.61
VARS2Q5ST30 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.89■□□□□ 0.61
VARS2Q5ST30 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.89■□□□□ 0.61
VARS2Q5ST30 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VARS2Q5ST30 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.89■□□□□ 0.61
VARS2Q5ST30 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VARS2Q5ST30 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.89■□□□□ 0.61
VARS2Q5ST30 AC116407.3-201ENST00000623905 1129 ntBASIC18.89■□□□□ 0.61
VARS2Q5ST30 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.89■□□□□ 0.61
VARS2Q5ST30 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VARS2Q5ST30 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VARS2Q5ST30 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.89■□□□□ 0.61
VARS2Q5ST30 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.89■□□□□ 0.61
VARS2Q5ST30 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VARS2Q5ST30 PMPCAP1-201ENST00000508114 1576 ntBASIC18.89■□□□□ 0.61
VARS2Q5ST30 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms