Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 AC113404.2-201ENST00000507884 177 ntBASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 LINC01126-201ENST00000623515 1646 ntBASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAP47Q5SQN1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 AL160237.2-201ENST00000556165 472 ntBASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAP47Q5SQN1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 AC104692.2-201ENST00000603054 253 ntBASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 AL121912.1-201ENST00000603683 238 ntBASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 AL591684.3-201ENST00000605187 298 ntBASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.4■□□□□ 0.38
SNAP47Q5SQN1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
SNAP47Q5SQN1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SNAP47Q5SQN1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
SNAP47Q5SQN1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SNAP47Q5SQN1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SNAP47Q5SQN1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.39■□□□□ 0.37
SNAP47Q5SQN1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.39■□□□□ 0.37
SNAP47Q5SQN1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SNAP47Q5SQN1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
SNAP47Q5SQN1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms