Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRK2Q5S007 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRK2Q5S007 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRK2Q5S007 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRK2Q5S007 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRK2Q5S007 TUBB3P1-201ENST00000405796 1332 ntBASIC15.42■□□□□ 0.06
LRRK2Q5S007 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
LRRK2Q5S007 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.42■□□□□ 0.06
LRRK2Q5S007 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRK2Q5S007 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRK2Q5S007 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRK2Q5S007 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.42■□□□□ 0.06
LRRK2Q5S007 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LRRK2Q5S007 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRK2Q5S007 AC006116.8-202ENST00000587620 1550 ntBASIC15.41■□□□□ 0.06
LRRK2Q5S007 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRK2Q5S007 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRK2Q5S007 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRK2Q5S007 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRK2Q5S007 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 FAM185BP-201ENST00000443595 716 ntBASIC15.41■□□□□ 0.06
LRRK2Q5S007 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRK2Q5S007 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRK2Q5S007 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRK2Q5S007 AL157384.1-201ENST00000445995 2473 ntBASIC15.41■□□□□ 0.06
LRRK2Q5S007 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRK2Q5S007 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRK2Q5S007 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRK2Q5S007 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 SLC25A6P5-201ENST00000435663 894 ntBASIC15.41■□□□□ 0.06
LRRK2Q5S007 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRK2Q5S007 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
LRRK2Q5S007 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRK2Q5S007 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRK2Q5S007 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRK2Q5S007 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRK2Q5S007 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRK2Q5S007 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
LRRK2Q5S007 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRK2Q5S007 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LRRK2Q5S007 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRK2Q5S007 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRK2Q5S007 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRK2Q5S007 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRK2Q5S007 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRK2Q5S007 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LRRK2Q5S007 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRK2Q5S007 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRK2Q5S007 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRK2Q5S007 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRK2Q5S007 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LRRK2Q5S007 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LRRK2Q5S007 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRK2Q5S007 AC122714.2-201ENST00000502787 707 ntBASIC15.4■□□□□ 0.06
LRRK2Q5S007 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRK2Q5S007 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRK2Q5S007 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LRRK2Q5S007 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
LRRK2Q5S007 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.39■□□□□ 0.06
LRRK2Q5S007 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRK2Q5S007 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRK2Q5S007 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRK2Q5S007 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRK2Q5S007 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRK2Q5S007 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRK2Q5S007 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRRK2Q5S007 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRRK2Q5S007 AC005237.2-201ENST00000434368 219 ntBASIC15.39■□□□□ 0.05
LRRK2Q5S007 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 AC125807.1-201ENST00000483097 614 ntBASIC15.39■□□□□ 0.05
LRRK2Q5S007 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 AC007064.4-201ENST00000637740 555 ntBASIC15.39■□□□□ 0.05
LRRK2Q5S007 AC068587.9-201ENST00000641814 219 ntBASIC15.39■□□□□ 0.05
LRRK2Q5S007 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
LRRK2Q5S007 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms