Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 MCCD1P1-208ENST00000445732 328 ntBASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 KRT16P5-201ENST00000455284 522 ntBASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 RN7SL471P-201ENST00000580476 299 ntBASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 CICP6-201ENST00000457191 2729 ntBASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 PCDHA14-201ENST00000506751 2298 ntBASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ANKRD55Q3KP44 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 GPAT2P1-201ENST00000444924 1672 ntBASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 AC239809.2-201ENST00000415381 517 ntBASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 NIFKP9-201ENST00000419265 221 ntBASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 AC008040.2-201ENST00000461049 708 ntBASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 C1QBPP2-201ENST00000528754 825 ntBASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 LINC00304-203ENST00000565008 1864 ntBASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.88□□□□□ -0.03
ANKRD55Q3KP44 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 PRORSD1P-201ENST00000295112 541 ntBASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.87□□□□□ -0.03
ANKRD55Q3KP44 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms