Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 AC132938.5-201ENST00000624980 1813 ntBASIC20.81■□□□□ 0.92
SHROOM1Q2M3G4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 SPDYE21P-201ENST00000413323 827 ntBASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 BX842568.4-201ENST00000421222 227 ntBASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 AC007967.2-201ENST00000432613 625 ntBASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 AL139424.1-201ENST00000607572 797 ntBASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 AC073592.5-201ENST00000624854 528 ntBASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 AL049757.1-201ENST00000616842 1596 ntBASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.8■□□□□ 0.92
SHROOM1Q2M3G4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 AP000997.3-201ENST00000623333 2250 ntBASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 COX5BP2-201ENST00000392354 334 ntBASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 MED15P5-201ENST00000423150 992 ntBASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 KRT18P27-201ENST00000427733 1299 ntBASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 AC055717.3-201ENST00000622967 595 ntBASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SHROOM1Q2M3G4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 AC009949.1-201ENST00000623048 1830 ntBASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 AC073621.1-201ENST00000392730 636 ntBASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 AC009947.1-201ENST00000444350 727 ntBASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 AC027601.4-201ENST00000611259 610 ntBASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 AL022326.1-202ENST00000641533 845 ntBASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHROOM1Q2M3G4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHROOM1Q2M3G4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms