Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB11AP62491 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB11AP62491 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB11AP62491 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB11AP62491 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB11AP62491 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB11AP62491 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB11AP62491 RPS2P4-201ENST00000476944 856 ntBASIC14.6□□□□□ -0.07
RAB11AP62491 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB11AP62491 AC124016.1-201ENST00000609552 612 ntBASIC14.6□□□□□ -0.07
RAB11AP62491 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB11AP62491 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB11AP62491 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB11AP62491 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB11AP62491 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RAB11AP62491 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.6□□□□□ -0.07
RAB11AP62491 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB11AP62491 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB11AP62491 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB11AP62491 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB11AP62491 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB11AP62491 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB11AP62491 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RAB11AP62491 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB11AP62491 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RAB11AP62491 PHGDH-209ENST00000641074 1780 ntBASIC14.6□□□□□ -0.07
RAB11AP62491 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RAB11AP62491 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB11AP62491 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB11AP62491 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.6□□□□□ -0.07
RAB11AP62491 PP12613-201ENST00000424958 2230 ntBASIC14.6□□□□□ -0.07
RAB11AP62491 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.6□□□□□ -0.07
RAB11AP62491 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB11AP62491 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAB11AP62491 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RAB11AP62491 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB11AP62491 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB11AP62491 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB11AP62491 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RAB11AP62491 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB11AP62491 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB11AP62491 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB11AP62491 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAB11AP62491 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
RAB11AP62491 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB11AP62491 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAB11AP62491 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB11AP62491 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.59□□□□□ -0.07
RAB11AP62491 CR392000.1-201ENST00000624770 1228 ntBASIC14.59□□□□□ -0.07
RAB11AP62491 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RAB11AP62491 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB11AP62491 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB11AP62491 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB11AP62491 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB11AP62491 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
RAB11AP62491 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAB11AP62491 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RAB11AP62491 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB11AP62491 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB11AP62491 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB11AP62491 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB11AP62491 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAB11AP62491 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB11AP62491 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB11AP62491 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.58□□□□□ -0.07
RAB11AP62491 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAB11AP62491 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB11AP62491 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB11AP62491 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.58□□□□□ -0.07
RAB11AP62491 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB11AP62491 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAB11AP62491 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.58□□□□□ -0.07
RAB11AP62491 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.58□□□□□ -0.07
RAB11AP62491 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.58□□□□□ -0.07
RAB11AP62491 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
RAB11AP62491 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB11AP62491 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB11AP62491 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB11AP62491 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RAB11AP62491 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RAB11AP62491 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB11AP62491 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB11AP62491 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB11AP62491 AC233263.1-201ENST00000578059 224 ntBASIC14.58□□□□□ -0.08
RAB11AP62491 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB11AP62491 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAB11AP62491 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RAB11AP62491 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB11AP62491 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB11AP62491 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB11AP62491 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RAB11AP62491 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB11AP62491 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB11AP62491 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB11AP62491 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RAB11AP62491 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB11AP62491 CICP6-201ENST00000457191 2729 ntBASIC14.57□□□□□ -0.08
RAB11AP62491 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB11AP62491 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB11AP62491 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms