Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
CXCR4P61073 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCR4P61073 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 B3GAT3P1-201ENST00000471720 806 ntBASIC16.34■□□□□ 0.21
CXCR4P61073 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.34■□□□□ 0.21
CXCR4P61073 AF186192.3-201ENST00000583427 947 ntBASIC16.34■□□□□ 0.21
CXCR4P61073 MIR6786-201ENST00000616843 113 ntBASIC16.34■□□□□ 0.21
CXCR4P61073 AC008622.2-201ENST00000617006 1229 ntBASIC16.34■□□□□ 0.21
CXCR4P61073 LINC01451-201ENST00000623792 534 ntBASIC16.34■□□□□ 0.21
CXCR4P61073 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.34■□□□□ 0.21
CXCR4P61073 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.34■□□□□ 0.21
CXCR4P61073 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CXCR4P61073 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CXCR4P61073 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.34■□□□□ 0.21
CXCR4P61073 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCR4P61073 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.34■□□□□ 0.21
CXCR4P61073 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR4P61073 AC099343.3-201ENST00000605834 2503 ntBASIC16.34■□□□□ 0.21
CXCR4P61073 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
CXCR4P61073 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCR4P61073 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCR4P61073 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCR4P61073 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCR4P61073 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCR4P61073 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CXCR4P61073 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCR4P61073 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR4P61073 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR4P61073 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR4P61073 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCR4P61073 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CXCR4P61073 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR4P61073 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCR4P61073 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.33■□□□□ 0.2
CXCR4P61073 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCR4P61073 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCR4P61073 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.33■□□□□ 0.2
CXCR4P61073 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.33■□□□□ 0.2
CXCR4P61073 AC073195.1-201ENST00000607241 877 ntBASIC16.33■□□□□ 0.2
CXCR4P61073 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR4P61073 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CXCR4P61073 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR4P61073 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CXCR4P61073 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR4P61073 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CXCR4P61073 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR4P61073 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR4P61073 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCR4P61073 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CXCR4P61073 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR4P61073 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCR4P61073 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR4P61073 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CXCR4P61073 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
CXCR4P61073 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR4P61073 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.32■□□□□ 0.2
CXCR4P61073 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CXCR4P61073 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.32■□□□□ 0.2
CXCR4P61073 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 PCDH8P1-201ENST00000428983 2773 ntBASIC16.32■□□□□ 0.2
CXCR4P61073 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.32■□□□□ 0.2
CXCR4P61073 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.32■□□□□ 0.2
CXCR4P61073 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CXCR4P61073 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CXCR4P61073 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
CXCR4P61073 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms