Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RHBDL3P58872 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RHBDL3P58872 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RHBDL3P58872 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RHBDL3P58872 AC087289.5-201ENST00000586076 3175 ntBASIC21.09■□□□□ 0.97
RHBDL3P58872 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RHBDL3P58872 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RHBDL3P58872 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RHBDL3P58872 AC004408.2-201ENST00000623613 2777 ntBASIC21.08■□□□□ 0.97
RHBDL3P58872 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RHBDL3P58872 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RHBDL3P58872 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RHBDL3P58872 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
RHBDL3P58872 PMS2P7-201ENST00000506558 1336 ntBASIC21.08■□□□□ 0.97
RHBDL3P58872 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RHBDL3P58872 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RHBDL3P58872 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.08■□□□□ 0.97
RHBDL3P58872 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RHBDL3P58872 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RHBDL3P58872 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RHBDL3P58872 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RHBDL3P58872 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RHBDL3P58872 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RHBDL3P58872 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.08■□□□□ 0.97
RHBDL3P58872 MIR940-201ENST00000401276 94 ntBASIC21.08■□□□□ 0.97
RHBDL3P58872 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RHBDL3P58872 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.08■□□□□ 0.97
RHBDL3P58872 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.08■□□□□ 0.97
RHBDL3P58872 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RHBDL3P58872 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.08■□□□□ 0.97
RHBDL3P58872 TERC-201ENST00000602385 541 ntBASIC21.08■□□□□ 0.97
RHBDL3P58872 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.08■□□□□ 0.97
RHBDL3P58872 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.08■□□□□ 0.96
RHBDL3P58872 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RHBDL3P58872 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.96
RHBDL3P58872 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RHBDL3P58872 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
RHBDL3P58872 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RHBDL3P58872 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RHBDL3P58872 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.07■□□□□ 0.96
RHBDL3P58872 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RHBDL3P58872 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
RHBDL3P58872 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
RHBDL3P58872 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
RHBDL3P58872 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RHBDL3P58872 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
RHBDL3P58872 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.07■□□□□ 0.96
RHBDL3P58872 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.07■□□□□ 0.96
RHBDL3P58872 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.07■□□□□ 0.96
RHBDL3P58872 AC140113.2-201ENST00000604370 208 ntBASIC21.07■□□□□ 0.96
RHBDL3P58872 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.07■□□□□ 0.96
RHBDL3P58872 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RHBDL3P58872 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RHBDL3P58872 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RHBDL3P58872 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.07■□□□□ 0.96
RHBDL3P58872 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RHBDL3P58872 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.06■□□□□ 0.96
RHBDL3P58872 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.06■□□□□ 0.96
RHBDL3P58872 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RHBDL3P58872 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RHBDL3P58872 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RHBDL3P58872 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RHBDL3P58872 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RHBDL3P58872 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RHBDL3P58872 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RHBDL3P58872 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RHBDL3P58872 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
RHBDL3P58872 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.06■□□□□ 0.96
RHBDL3P58872 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.06■□□□□ 0.96
RHBDL3P58872 AC090164.3-201ENST00000610780 2143 ntBASIC21.06■□□□□ 0.96
RHBDL3P58872 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RHBDL3P58872 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
RHBDL3P58872 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RHBDL3P58872 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.06■□□□□ 0.96
RHBDL3P58872 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RHBDL3P58872 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RHBDL3P58872 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RHBDL3P58872 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RHBDL3P58872 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
RHBDL3P58872 AL020996.1-203ENST00000536896 2307 ntBASIC21.05■□□□□ 0.96
RHBDL3P58872 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.05■□□□□ 0.96
RHBDL3P58872 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.05■□□□□ 0.96
RHBDL3P58872 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RHBDL3P58872 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RHBDL3P58872 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.05■□□□□ 0.96
RHBDL3P58872 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RHBDL3P58872 AL020989.1-201ENST00000422979 469 ntBASIC21.05■□□□□ 0.96
RHBDL3P58872 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.05■□□□□ 0.96
RHBDL3P58872 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.05■□□□□ 0.96
RHBDL3P58872 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RHBDL3P58872 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.05■□□□□ 0.96
RHBDL3P58872 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.05■□□□□ 0.96
RHBDL3P58872 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.05■□□□□ 0.96
RHBDL3P58872 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
RHBDL3P58872 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RHBDL3P58872 AL356488.2-201ENST00000602755 427 ntBASIC21.05■□□□□ 0.96
RHBDL3P58872 AC027601.4-201ENST00000611259 610 ntBASIC21.05■□□□□ 0.96
RHBDL3P58872 AC139530.3-201ENST00000620344 690 ntBASIC21.05■□□□□ 0.96
RHBDL3P58872 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.05■□□□□ 0.96
RHBDL3P58872 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms