Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLRN1P58418 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLRN1P58418 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLRN1P58418 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
CLRN1P58418 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLRN1P58418 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.03■□□□□ 0.16
CLRN1P58418 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLRN1P58418 HLA-F-220ENST00000434407 884 ntBASIC16.03■□□□□ 0.16
CLRN1P58418 AC112907.2-201ENST00000448639 330 ntBASIC16.03■□□□□ 0.16
CLRN1P58418 AC092597.1-201ENST00000487352 616 ntBASIC16.03■□□□□ 0.16
CLRN1P58418 DUTP2-201ENST00000519164 463 ntBASIC16.03■□□□□ 0.16
CLRN1P58418 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.03■□□□□ 0.16
CLRN1P58418 LINC01238-205ENST00000567549 1107 ntBASIC16.03■□□□□ 0.16
CLRN1P58418 RN7SL850P-201ENST00000579959 291 ntBASIC16.03■□□□□ 0.16
CLRN1P58418 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.03■□□□□ 0.16
CLRN1P58418 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CLRN1P58418 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLRN1P58418 AC005332.8-201ENST00000622750 2735 ntBASIC16.03■□□□□ 0.16
CLRN1P58418 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CLRN1P58418 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLRN1P58418 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLRN1P58418 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLRN1P58418 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.03■□□□□ 0.16
CLRN1P58418 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.03■□□□□ 0.16
CLRN1P58418 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CLRN1P58418 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CLRN1P58418 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLRN1P58418 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.03■□□□□ 0.16
CLRN1P58418 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLRN1P58418 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLRN1P58418 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLRN1P58418 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLRN1P58418 LINC00167-201ENST00000530583 1419 ntBASIC16.02■□□□□ 0.16
CLRN1P58418 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLRN1P58418 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
CLRN1P58418 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
CLRN1P58418 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
CLRN1P58418 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.02■□□□□ 0.16
CLRN1P58418 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLRN1P58418 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLRN1P58418 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.02■□□□□ 0.16
CLRN1P58418 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CLRN1P58418 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.02■□□□□ 0.16
CLRN1P58418 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLRN1P58418 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLRN1P58418 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLRN1P58418 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CLRN1P58418 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CLRN1P58418 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CLRN1P58418 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLRN1P58418 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLRN1P58418 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLRN1P58418 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLRN1P58418 KRT18P38-201ENST00000449496 1282 ntBASIC16.02■□□□□ 0.16
CLRN1P58418 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.02■□□□□ 0.16
CLRN1P58418 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLRN1P58418 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.02■□□□□ 0.16
CLRN1P58418 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.02■□□□□ 0.16
CLRN1P58418 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.02■□□□□ 0.16
CLRN1P58418 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.02■□□□□ 0.16
CLRN1P58418 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.02■□□□□ 0.16
CLRN1P58418 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.02■□□□□ 0.16
CLRN1P58418 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLRN1P58418 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CLRN1P58418 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CLRN1P58418 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLRN1P58418 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CLRN1P58418 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLRN1P58418 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CLRN1P58418 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLRN1P58418 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLRN1P58418 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLRN1P58418 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLRN1P58418 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLRN1P58418 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLRN1P58418 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.01■□□□□ 0.15
CLRN1P58418 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 AC067852.2-201ENST00000590513 2313 ntBASIC16.01■□□□□ 0.15
CLRN1P58418 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
CLRN1P58418 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.01■□□□□ 0.15
CLRN1P58418 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.01■□□□□ 0.15
CLRN1P58418 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLRN1P58418 RCN1P1-201ENST00000400413 996 ntBASIC16.01■□□□□ 0.15
CLRN1P58418 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.01■□□□□ 0.15
CLRN1P58418 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.01■□□□□ 0.15
CLRN1P58418 TMPOP1-202ENST00000424642 1267 ntBASIC16.01■□□□□ 0.15
CLRN1P58418 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms