Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN8P56748 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CLDN8P56748 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CLDN8P56748 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLDN8P56748 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN8P56748 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN8P56748 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN8P56748 AC034232.1-201ENST00000506026 1064 ntBASIC17.04■□□□□ 0.32
CLDN8P56748 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN8P56748 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN8P56748 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CLDN8P56748 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN8P56748 GCSHP2-201ENST00000560971 527 ntBASIC17.04■□□□□ 0.32
CLDN8P56748 AL138966.2-201ENST00000621997 464 ntBASIC17.04■□□□□ 0.32
CLDN8P56748 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CLDN8P56748 AC009949.1-201ENST00000623048 1830 ntBASIC17.04■□□□□ 0.32
CLDN8P56748 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN8P56748 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN8P56748 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN8P56748 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN8P56748 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN8P56748 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN8P56748 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CLDN8P56748 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLDN8P56748 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLDN8P56748 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN8P56748 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLDN8P56748 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN8P56748 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN8P56748 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CLDN8P56748 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN8P56748 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN8P56748 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN8P56748 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLDN8P56748 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLDN8P56748 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN8P56748 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN8P56748 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN8P56748 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN8P56748 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN8P56748 DDX43P3-201ENST00000441064 443 ntBASIC17.03■□□□□ 0.32
CLDN8P56748 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN8P56748 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN8P56748 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN8P56748 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN8P56748 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN8P56748 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN8P56748 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN8P56748 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN8P56748 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN8P56748 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN8P56748 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN8P56748 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN8P56748 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN8P56748 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN8P56748 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN8P56748 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN8P56748 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN8P56748 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN8P56748 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN8P56748 AC080080.1-201ENST00000625121 2420 ntBASIC17.02■□□□□ 0.32
CLDN8P56748 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN8P56748 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN8P56748 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLDN8P56748 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN8P56748 REXO1L11P-201ENST00000620964 1927 ntBASIC17.02■□□□□ 0.32
CLDN8P56748 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN8P56748 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN8P56748 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN8P56748 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN8P56748 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN8P56748 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN8P56748 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN8P56748 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN8P56748 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN8P56748 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN8P56748 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN8P56748 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN8P56748 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN8P56748 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN8P56748 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN8P56748 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN8P56748 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN8P56748 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN8P56748 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.02■□□□□ 0.31
CLDN8P56748 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN8P56748 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN8P56748 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.02■□□□□ 0.31
CLDN8P56748 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN8P56748 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms