Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN6P56747 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN6P56747 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN6P56747 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN6P56747 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN6P56747 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CLDN6P56747 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CLDN6P56747 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN6P56747 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN6P56747 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN6P56747 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN6P56747 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN6P56747 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLDN6P56747 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN6P56747 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CLDN6P56747 AC007967.3-201ENST00000434308 558 ntBASIC17.14■□□□□ 0.33
CLDN6P56747 AC108751.1-201ENST00000490852 363 ntBASIC17.14■□□□□ 0.33
CLDN6P56747 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.14■□□□□ 0.33
CLDN6P56747 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.14■□□□□ 0.33
CLDN6P56747 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.14■□□□□ 0.33
CLDN6P56747 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN6P56747 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN6P56747 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN6P56747 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN6P56747 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CLDN6P56747 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN6P56747 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN6P56747 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN6P56747 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN6P56747 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN6P56747 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLDN6P56747 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN6P56747 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN6P56747 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN6P56747 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN6P56747 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN6P56747 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN6P56747 MTDHP5-201ENST00000598980 586 ntBASIC17.13■□□□□ 0.33
CLDN6P56747 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN6P56747 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN6P56747 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.13■□□□□ 0.33
CLDN6P56747 AC092865.6-201ENST00000642101 219 ntBASIC17.13■□□□□ 0.33
CLDN6P56747 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN6P56747 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN6P56747 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN6P56747 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN6P56747 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN6P56747 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN6P56747 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CLDN6P56747 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN6P56747 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN6P56747 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN6P56747 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN6P56747 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN6P56747 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLDN6P56747 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLDN6P56747 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN6P56747 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN6P56747 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN6P56747 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN6P56747 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN6P56747 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN6P56747 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CLDN6P56747 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN6P56747 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN6P56747 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN6P56747 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN6P56747 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN6P56747 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN6P56747 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.12■□□□□ 0.33
CLDN6P56747 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.12■□□□□ 0.33
CLDN6P56747 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN6P56747 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN6P56747 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN6P56747 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
CLDN6P56747 AC018845.2-201ENST00000568326 409 ntBASIC17.12■□□□□ 0.33
CLDN6P56747 MIR4469-201ENST00000583919 79 ntBASIC17.12■□□□□ 0.33
CLDN6P56747 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN6P56747 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN6P56747 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.12■□□□□ 0.33
CLDN6P56747 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN6P56747 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN6P56747 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN6P56747 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN6P56747 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN6P56747 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN6P56747 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN6P56747 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN6P56747 AC079776.2-201ENST00000641154 1609 ntBASIC17.11■□□□□ 0.33
CLDN6P56747 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN6P56747 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms