Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDH6P55285 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH6P55285 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH6P55285 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH6P55285 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH6P55285 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH6P55285 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH6P55285 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH6P55285 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH6P55285 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH6P55285 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH6P55285 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH6P55285 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH6P55285 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH6P55285 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDH6P55285 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
CDH6P55285 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDH6P55285 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDH6P55285 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDH6P55285 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH6P55285 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDH6P55285 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH6P55285 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH6P55285 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH6P55285 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH6P55285 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH6P55285 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH6P55285 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH6P55285 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH6P55285 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH6P55285 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH6P55285 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH6P55285 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH6P55285 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH6P55285 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH6P55285 MIR662-201ENST00000384847 95 ntBASIC18.65■□□□□ 0.58
CDH6P55285 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.65■□□□□ 0.58
CDH6P55285 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.65■□□□□ 0.58
CDH6P55285 KRT18P65-201ENST00000439811 1286 ntBASIC18.65■□□□□ 0.58
CDH6P55285 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.65■□□□□ 0.58
CDH6P55285 AP003733.1-201ENST00000491725 852 ntBASIC18.65■□□□□ 0.58
CDH6P55285 AC022616.7-201ENST00000525383 220 ntBASIC18.65■□□□□ 0.58
CDH6P55285 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.65■□□□□ 0.58
CDH6P55285 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.65■□□□□ 0.58
CDH6P55285 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CDH6P55285 HYMAI.1-201ENST00000620949 238 ntBASIC18.65■□□□□ 0.58
CDH6P55285 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH6P55285 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH6P55285 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH6P55285 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH6P55285 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH6P55285 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH6P55285 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH6P55285 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDH6P55285 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CDH6P55285 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CDH6P55285 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH6P55285 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH6P55285 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDH6P55285 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDH6P55285 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDH6P55285 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CDH6P55285 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CDH6P55285 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH6P55285 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH6P55285 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CDH6P55285 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
CDH6P55285 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH6P55285 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH6P55285 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
CDH6P55285 VENTXP5-201ENST00000523979 775 ntBASIC18.64■□□□□ 0.57
CDH6P55285 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH6P55285 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH6P55285 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CDH6P55285 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.64■□□□□ 0.57
CDH6P55285 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH6P55285 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH6P55285 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CDH6P55285 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH6P55285 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CDH6P55285 LINC01311-201ENST00000565162 1445 ntBASIC18.64■□□□□ 0.57
CDH6P55285 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDH6P55285 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.64■□□□□ 0.57
CDH6P55285 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDH6P55285 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH6P55285 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.63■□□□□ 0.57
CDH6P55285 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH6P55285 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH6P55285 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.63■□□□□ 0.57
CDH6P55285 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 IGHGP-201ENST00000390555 1178 ntBASIC18.63■□□□□ 0.57
CDH6P55285 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDH6P55285 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.63■□□□□ 0.57
CDH6P55285 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms