Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
APOC4P55056 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.12□□□□□ -0.31
APOC4P55056 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.12□□□□□ -0.31
APOC4P55056 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOC4P55056 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
APOC4P55056 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
APOC4P55056 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC4P55056 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
APOC4P55056 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
APOC4P55056 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC4P55056 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.11□□□□□ -0.31
APOC4P55056 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
APOC4P55056 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC4P55056 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.11□□□□□ -0.31
APOC4P55056 EMBP1-201ENST00000458200 901 ntBASIC13.11□□□□□ -0.31
APOC4P55056 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC4P55056 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.11□□□□□ -0.31
APOC4P55056 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.11□□□□□ -0.31
APOC4P55056 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.11□□□□□ -0.31
APOC4P55056 AC005336.2-201ENST00000593183 939 ntBASIC13.11□□□□□ -0.31
APOC4P55056 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.11□□□□□ -0.31
APOC4P55056 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOC4P55056 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
APOC4P55056 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC4P55056 PHGDH-209ENST00000641074 1780 ntBASIC13.11□□□□□ -0.31
APOC4P55056 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
APOC4P55056 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
APOC4P55056 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 AC125634.1-201ENST00000438758 1403 ntBASIC13.11□□□□□ -0.31
APOC4P55056 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC4P55056 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC4P55056 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC4P55056 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
APOC4P55056 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
APOC4P55056 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOC4P55056 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOC4P55056 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.11□□□□□ -0.31
APOC4P55056 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.11□□□□□ -0.31
APOC4P55056 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC4P55056 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC4P55056 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
APOC4P55056 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
APOC4P55056 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.1□□□□□ -0.31
APOC4P55056 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
APOC4P55056 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
APOC4P55056 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
APOC4P55056 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 FAM220CP-201ENST00000395253 831 ntBASIC13.1□□□□□ -0.31
APOC4P55056 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.1□□□□□ -0.31
APOC4P55056 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC4P55056 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC4P55056 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC4P55056 DUTP2-201ENST00000519164 463 ntBASIC13.1□□□□□ -0.31
APOC4P55056 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.1□□□□□ -0.31
APOC4P55056 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms