Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.31■□□□□ 0.52
ATXN3P54252 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATXN3P54252 GUSBP12-201ENST00000513727 720 ntBASIC18.31■□□□□ 0.52
ATXN3P54252 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.31■□□□□ 0.52
ATXN3P54252 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ATXN3P54252 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATXN3P54252 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ATXN3P54252 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATXN3P54252 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATXN3P54252 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATXN3P54252 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATXN3P54252 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATXN3P54252 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ATXN3P54252 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATXN3P54252 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.31■□□□□ 0.52
ATXN3P54252 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATXN3P54252 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.3■□□□□ 0.52
ATXN3P54252 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.3■□□□□ 0.52
ATXN3P54252 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.3■□□□□ 0.52
ATXN3P54252 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ATXN3P54252 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.3■□□□□ 0.52
ATXN3P54252 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
ATXN3P54252 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ATXN3P54252 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 KRT18P13-201ENST00000400056 1290 ntBASIC18.3■□□□□ 0.52
ATXN3P54252 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.3■□□□□ 0.52
ATXN3P54252 PMS2P1-201ENST00000431037 1228 ntBASIC18.3■□□□□ 0.52
ATXN3P54252 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.3■□□□□ 0.52
ATXN3P54252 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.3■□□□□ 0.52
ATXN3P54252 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.3■□□□□ 0.52
ATXN3P54252 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.3■□□□□ 0.52
ATXN3P54252 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.3■□□□□ 0.52
ATXN3P54252 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.3■□□□□ 0.52
ATXN3P54252 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.3■□□□□ 0.52
ATXN3P54252 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.3■□□□□ 0.52
ATXN3P54252 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
ATXN3P54252 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.3■□□□□ 0.52
ATXN3P54252 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.3■□□□□ 0.52
ATXN3P54252 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATXN3P54252 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.3■□□□□ 0.52
ATXN3P54252 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
ATXN3P54252 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.29■□□□□ 0.52
ATXN3P54252 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.29■□□□□ 0.52
ATXN3P54252 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.29■□□□□ 0.52
ATXN3P54252 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ATXN3P54252 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ATXN3P54252 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
ATXN3P54252 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.29■□□□□ 0.52
ATXN3P54252 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.29■□□□□ 0.52
ATXN3P54252 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.29■□□□□ 0.52
ATXN3P54252 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.29■□□□□ 0.52
ATXN3P54252 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.29■□□□□ 0.52
ATXN3P54252 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.29■□□□□ 0.52
ATXN3P54252 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.29■□□□□ 0.52
ATXN3P54252 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.29■□□□□ 0.52
ATXN3P54252 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.29■□□□□ 0.52
ATXN3P54252 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.29■□□□□ 0.52
ATXN3P54252 AL390719.2-201ENST00000606993 987 ntBASIC18.29■□□□□ 0.52
ATXN3P54252 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.29■□□□□ 0.52
ATXN3P54252 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.29■□□□□ 0.52
ATXN3P54252 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.29■□□□□ 0.52
ATXN3P54252 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
ATXN3P54252 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.29■□□□□ 0.52
ATXN3P54252 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ATXN3P54252 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
ATXN3P54252 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATXN3P54252 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms