Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL15A1P39059 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL15A1P39059 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.21
COL15A1P39059 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
COL15A1P39059 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.58■■□□□ 1.21
COL15A1P39059 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL15A1P39059 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL15A1P39059 PRYP5-201ENST00000451909 266 ntBASIC22.58■■□□□ 1.21
COL15A1P39059 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC22.58■■□□□ 1.21
COL15A1P39059 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC22.58■■□□□ 1.21
COL15A1P39059 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC22.58■■□□□ 1.21
COL15A1P39059 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
COL15A1P39059 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
COL15A1P39059 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.2
COL15A1P39059 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
COL15A1P39059 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
COL15A1P39059 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL15A1P39059 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL15A1P39059 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.57■■□□□ 1.2
COL15A1P39059 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL15A1P39059 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC22.57■■□□□ 1.2
COL15A1P39059 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL15A1P39059 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
COL15A1P39059 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC22.57■■□□□ 1.2
COL15A1P39059 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
COL15A1P39059 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL15A1P39059 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC22.57■■□□□ 1.2
COL15A1P39059 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC22.57■■□□□ 1.2
COL15A1P39059 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC22.57■■□□□ 1.2
COL15A1P39059 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC22.57■■□□□ 1.2
COL15A1P39059 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.57■■□□□ 1.2
COL15A1P39059 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC22.57■■□□□ 1.2
COL15A1P39059 AC073592.5-201ENST00000624854 528 ntBASIC22.57■■□□□ 1.2
COL15A1P39059 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL15A1P39059 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
COL15A1P39059 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL15A1P39059 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22.57■■□□□ 1.2
COL15A1P39059 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC22.57■■□□□ 1.2
COL15A1P39059 AC093677.2-201ENST00000600169 1863 ntBASIC22.57■■□□□ 1.2
COL15A1P39059 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL15A1P39059 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL15A1P39059 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL15A1P39059 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL15A1P39059 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL15A1P39059 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
COL15A1P39059 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL15A1P39059 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
COL15A1P39059 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
COL15A1P39059 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC22.56■■□□□ 1.2
COL15A1P39059 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC22.56■■□□□ 1.2
COL15A1P39059 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC22.56■■□□□ 1.2
COL15A1P39059 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC22.56■■□□□ 1.2
COL15A1P39059 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL15A1P39059 KRT18P2-201ENST00000447938 1258 ntBASIC22.56■■□□□ 1.2
COL15A1P39059 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC22.56■■□□□ 1.2
COL15A1P39059 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
COL15A1P39059 ALG1L5P-201ENST00000482043 771 ntBASIC22.56■■□□□ 1.2
COL15A1P39059 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC22.56■■□□□ 1.2
COL15A1P39059 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.56■■□□□ 1.2
COL15A1P39059 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC22.56■■□□□ 1.2
COL15A1P39059 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC22.56■■□□□ 1.2
COL15A1P39059 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC22.56■■□□□ 1.2
COL15A1P39059 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC22.56■■□□□ 1.2
COL15A1P39059 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.56■■□□□ 1.2
COL15A1P39059 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL15A1P39059 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.56■■□□□ 1.2
COL15A1P39059 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC22.56■■□□□ 1.2
COL15A1P39059 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL15A1P39059 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL15A1P39059 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC22.56■■□□□ 1.2
COL15A1P39059 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL15A1P39059 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL15A1P39059 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC22.55■■□□□ 1.2
COL15A1P39059 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC22.55■■□□□ 1.2
COL15A1P39059 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC22.55■■□□□ 1.2
COL15A1P39059 DUTP2-201ENST00000519164 463 ntBASIC22.55■■□□□ 1.2
COL15A1P39059 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC22.55■■□□□ 1.2
COL15A1P39059 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC22.55■■□□□ 1.2
COL15A1P39059 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
COL15A1P39059 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL15A1P39059 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL15A1P39059 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
COL15A1P39059 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL15A1P39059 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL15A1P39059 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL15A1P39059 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC22.55■■□□□ 1.2
COL15A1P39059 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
COL15A1P39059 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL15A1P39059 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL15A1P39059 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC22.54■■□□□ 1.2
COL15A1P39059 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL15A1P39059 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL15A1P39059 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL15A1P39059 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL15A1P39059 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL15A1P39059 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC22.54■■□□□ 1.2
COL15A1P39059 AC211486.1-202ENST00000416371 468 ntBASIC22.54■■□□□ 1.2
COL15A1P39059 MCCD1P2-201ENST00000423228 335 ntBASIC22.54■■□□□ 1.2
COL15A1P39059 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.54■■□□□ 1.2
COL15A1P39059 AC211476.1-201ENST00000503899 468 ntBASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms