Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCNN1AP37088 AC133963.1-201ENST00000504166 1679 ntBASIC18.6■□□□□ 0.57
SCNN1AP37088 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCNN1AP37088 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCNN1AP37088 AC010460.3-201ENST00000511359 1579 ntBASIC18.6■□□□□ 0.57
SCNN1AP37088 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.6■□□□□ 0.57
SCNN1AP37088 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.6■□□□□ 0.57
SCNN1AP37088 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.6■□□□□ 0.57
SCNN1AP37088 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCNN1AP37088 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCNN1AP37088 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCNN1AP37088 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.6■□□□□ 0.57
SCNN1AP37088 AC007967.3-201ENST00000434308 558 ntBASIC18.6■□□□□ 0.57
SCNN1AP37088 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
SCNN1AP37088 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.6■□□□□ 0.57
SCNN1AP37088 AC091607.1-201ENST00000490318 1060 ntBASIC18.6■□□□□ 0.57
SCNN1AP37088 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.6■□□□□ 0.57
SCNN1AP37088 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.6■□□□□ 0.57
SCNN1AP37088 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SCNN1AP37088 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.6■□□□□ 0.57
SCNN1AP37088 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.6■□□□□ 0.57
SCNN1AP37088 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.6■□□□□ 0.57
SCNN1AP37088 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
SCNN1AP37088 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.6■□□□□ 0.57
SCNN1AP37088 AL133373.2-201ENST00000623187 2828 ntBASIC18.6■□□□□ 0.57
SCNN1AP37088 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SCNN1AP37088 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCNN1AP37088 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCNN1AP37088 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCNN1AP37088 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCNN1AP37088 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCNN1AP37088 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCNN1AP37088 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SCNN1AP37088 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.6■□□□□ 0.57
SCNN1AP37088 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCNN1AP37088 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.59■□□□□ 0.57
SCNN1AP37088 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.59■□□□□ 0.57
SCNN1AP37088 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.59■□□□□ 0.57
SCNN1AP37088 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.59■□□□□ 0.57
SCNN1AP37088 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SCNN1AP37088 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.59■□□□□ 0.57
SCNN1AP37088 REXO1L11P-201ENST00000620964 1927 ntBASIC18.59■□□□□ 0.57
SCNN1AP37088 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SCNN1AP37088 IGHV3-47-201ENST00000425060 335 ntBASIC18.59■□□□□ 0.57
SCNN1AP37088 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.59■□□□□ 0.57
SCNN1AP37088 KRT17P6-201ENST00000453795 1220 ntBASIC18.59■□□□□ 0.57
SCNN1AP37088 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.59■□□□□ 0.57
SCNN1AP37088 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.59■□□□□ 0.57
SCNN1AP37088 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.59■□□□□ 0.57
SCNN1AP37088 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.59■□□□□ 0.57
SCNN1AP37088 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.59■□□□□ 0.57
SCNN1AP37088 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.59■□□□□ 0.57
SCNN1AP37088 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SCNN1AP37088 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
SCNN1AP37088 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.59■□□□□ 0.57
SCNN1AP37088 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.59■□□□□ 0.57
SCNN1AP37088 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SCNN1AP37088 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
SCNN1AP37088 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.59■□□□□ 0.57
SCNN1AP37088 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 HLA-J-201ENST00000462773 1622 ntBASIC18.59■□□□□ 0.57
SCNN1AP37088 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SCNN1AP37088 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCNN1AP37088 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
SCNN1AP37088 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SCNN1AP37088 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SCNN1AP37088 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCNN1AP37088 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SCNN1AP37088 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.58■□□□□ 0.57
SCNN1AP37088 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
SCNN1AP37088 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCNN1AP37088 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCNN1AP37088 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCNN1AP37088 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCNN1AP37088 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCNN1AP37088 UPK3BP1-201ENST00000428678 509 ntBASIC18.58■□□□□ 0.56
SCNN1AP37088 AC002558.1-201ENST00000488906 803 ntBASIC18.58■□□□□ 0.56
SCNN1AP37088 AC012615.1-201ENST00000565797 1299 ntBASIC18.58■□□□□ 0.56
SCNN1AP37088 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.58■□□□□ 0.56
SCNN1AP37088 AC011467.2-201ENST00000598425 242 ntBASIC18.58■□□□□ 0.56
SCNN1AP37088 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.58■□□□□ 0.56
SCNN1AP37088 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCNN1AP37088 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
SCNN1AP37088 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SCNN1AP37088 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.58■□□□□ 0.56
SCNN1AP37088 AC018470.1-201ENST00000624790 3129 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms