Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CHRNA3P32297 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.9■□□□□ 0.62
CHRNA3P32297 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CHRNA3P32297 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.9■□□□□ 0.62
CHRNA3P32297 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.9■□□□□ 0.62
CHRNA3P32297 AL671277.2-201ENST00000458060 996 ntBASIC18.9■□□□□ 0.62
CHRNA3P32297 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.9■□□□□ 0.62
CHRNA3P32297 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.9■□□□□ 0.62
CHRNA3P32297 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.9■□□□□ 0.62
CHRNA3P32297 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.9■□□□□ 0.62
CHRNA3P32297 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CHRNA3P32297 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.9■□□□□ 0.62
CHRNA3P32297 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHRNA3P32297 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.62
CHRNA3P32297 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHRNA3P32297 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHRNA3P32297 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHRNA3P32297 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.89■□□□□ 0.61
CHRNA3P32297 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CHRNA3P32297 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHRNA3P32297 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA3P32297 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA3P32297 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA3P32297 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA3P32297 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA3P32297 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA3P32297 AC112497.1-201ENST00000624824 639 ntBASIC18.89■□□□□ 0.61
CHRNA3P32297 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.89■□□□□ 0.61
CHRNA3P32297 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.89■□□□□ 0.61
CHRNA3P32297 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CHRNA3P32297 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.89■□□□□ 0.61
CHRNA3P32297 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CHRNA3P32297 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
CHRNA3P32297 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.89■□□□□ 0.61
CHRNA3P32297 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA3P32297 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA3P32297 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNA3P32297 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.89■□□□□ 0.61
CHRNA3P32297 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNA3P32297 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CHRNA3P32297 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNA3P32297 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.88■□□□□ 0.61
CHRNA3P32297 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 AC009053.2-201ENST00000563701 2365 ntBASIC18.88■□□□□ 0.61
CHRNA3P32297 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHRNA3P32297 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHRNA3P32297 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNA3P32297 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.88■□□□□ 0.61
CHRNA3P32297 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNA3P32297 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 AC112907.2-201ENST00000448639 330 ntBASIC18.88■□□□□ 0.61
CHRNA3P32297 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.88■□□□□ 0.61
CHRNA3P32297 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.88■□□□□ 0.61
CHRNA3P32297 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNA3P32297 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNA3P32297 KRT8P7-201ENST00000533003 1432 ntBASIC18.88■□□□□ 0.61
CHRNA3P32297 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNA3P32297 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNA3P32297 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.88■□□□□ 0.61
CHRNA3P32297 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.88■□□□□ 0.61
CHRNA3P32297 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CHRNA3P32297 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
CHRNA3P32297 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CHRNA3P32297 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNA3P32297 AC141586.5-201ENST00000624546 2050 ntBASIC18.88■□□□□ 0.61
CHRNA3P32297 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNA3P32297 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNA3P32297 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA3P32297 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CHRNA3P32297 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA3P32297 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.87■□□□□ 0.61
CHRNA3P32297 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA3P32297 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNA3P32297 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms