Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.77■□□□□ 0.28
CHMP24386 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.77■□□□□ 0.28
CHMP24386 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.77■□□□□ 0.28
CHMP24386 MIR3180-4-201ENST00000582223 153 ntBASIC16.77■□□□□ 0.28
CHMP24386 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.77■□□□□ 0.28
CHMP24386 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CHMP24386 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHMP24386 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP24386 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP24386 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.77■□□□□ 0.27
CHMP24386 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP24386 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP24386 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.77■□□□□ 0.27
CHMP24386 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CHMP24386 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP24386 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.77■□□□□ 0.27
CHMP24386 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.77■□□□□ 0.27
CHMP24386 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP24386 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHMP24386 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.76■□□□□ 0.27
CHMP24386 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.76■□□□□ 0.27
CHMP24386 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP24386 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP24386 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.76■□□□□ 0.27
CHMP24386 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.76■□□□□ 0.27
CHMP24386 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.76■□□□□ 0.27
CHMP24386 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP24386 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP24386 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.76■□□□□ 0.27
CHMP24386 RASA4DP-201ENST00000460726 1199 ntBASIC16.76■□□□□ 0.27
CHMP24386 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CHMP24386 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP24386 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.76■□□□□ 0.27
CHMP24386 AC091076.1-201ENST00000610741 619 ntBASIC16.76■□□□□ 0.27
CHMP24386 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP24386 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.76■□□□□ 0.27
CHMP24386 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP24386 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP24386 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP24386 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP24386 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP24386 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP24386 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CHMP24386 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 AC108860.2-201ENST00000562760 2183 ntBASIC16.75■□□□□ 0.27
CHMP24386 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP24386 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP24386 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.75■□□□□ 0.27
CHMP24386 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHMP24386 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP24386 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP24386 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CHMP24386 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 AP000593.1-201ENST00000393668 712 ntBASIC16.75■□□□□ 0.27
CHMP24386 AL031133.1-201ENST00000406807 723 ntBASIC16.75■□□□□ 0.27
CHMP24386 KRT18P38-201ENST00000449496 1282 ntBASIC16.75■□□□□ 0.27
CHMP24386 AL671277.2-201ENST00000458060 996 ntBASIC16.75■□□□□ 0.27
CHMP24386 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP24386 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.75■□□□□ 0.27
CHMP24386 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.75■□□□□ 0.27
CHMP24386 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.75■□□□□ 0.27
CHMP24386 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP24386 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.75■□□□□ 0.27
CHMP24386 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.75■□□□□ 0.27
CHMP24386 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 MIR3917-201ENST00000580971 93 ntBASIC16.75■□□□□ 0.27
CHMP24386 AL121956.5-201ENST00000625261 221 ntBASIC16.75■□□□□ 0.27
CHMP24386 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP24386 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP24386 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 PCDHA12-202ENST00000613593 2588 ntBASIC16.75■□□□□ 0.27
CHMP24386 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP24386 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms