Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BMP4P12644 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.46■□□□□ 0.23
BMP4P12644 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BMP4P12644 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BMP4P12644 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
BMP4P12644 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BMP4P12644 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
BMP4P12644 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
BMP4P12644 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BMP4P12644 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BMP4P12644 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.46■□□□□ 0.23
BMP4P12644 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BMP4P12644 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BMP4P12644 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.46■□□□□ 0.23
BMP4P12644 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
BMP4P12644 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.46■□□□□ 0.23
BMP4P12644 HMGA1P5-201ENST00000412453 271 ntBASIC16.46■□□□□ 0.23
BMP4P12644 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.46■□□□□ 0.23
BMP4P12644 TSPY17P-201ENST00000450329 467 ntBASIC16.46■□□□□ 0.23
BMP4P12644 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.46■□□□□ 0.23
BMP4P12644 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
BMP4P12644 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.46■□□□□ 0.23
BMP4P12644 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BMP4P12644 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.46■□□□□ 0.23
BMP4P12644 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BMP4P12644 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.46■□□□□ 0.23
BMP4P12644 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
BMP4P12644 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BMP4P12644 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BMP4P12644 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BMP4P12644 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
BMP4P12644 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BMP4P12644 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
BMP4P12644 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
BMP4P12644 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
BMP4P12644 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BMP4P12644 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.45■□□□□ 0.22
BMP4P12644 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.45■□□□□ 0.22
BMP4P12644 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.45■□□□□ 0.22
BMP4P12644 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.45■□□□□ 0.22
BMP4P12644 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
BMP4P12644 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.45■□□□□ 0.22
BMP4P12644 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
BMP4P12644 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.45■□□□□ 0.22
BMP4P12644 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 ARMC10P1-201ENST00000313754 855 ntBASIC16.45■□□□□ 0.22
BMP4P12644 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
BMP4P12644 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.45■□□□□ 0.22
BMP4P12644 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.45■□□□□ 0.22
BMP4P12644 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BMP4P12644 AC010653.2-201ENST00000623505 997 ntBASIC16.45■□□□□ 0.22
BMP4P12644 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.45■□□□□ 0.22
BMP4P12644 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.45■□□□□ 0.22
BMP4P12644 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.45■□□□□ 0.22
BMP4P12644 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
BMP4P12644 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BMP4P12644 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
BMP4P12644 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BMP4P12644 FLJ13224-201ENST00000313737 1514 ntBASIC16.45■□□□□ 0.22
BMP4P12644 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.44■□□□□ 0.22
BMP4P12644 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BMP4P12644 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
BMP4P12644 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.44■□□□□ 0.22
BMP4P12644 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.44■□□□□ 0.22
BMP4P12644 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.44■□□□□ 0.22
BMP4P12644 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BMP4P12644 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.44■□□□□ 0.22
BMP4P12644 OR6D1P-202ENST00000641007 5290 ntBASIC16.44■□□□□ 0.22
BMP4P12644 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BMP4P12644 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BMP4P12644 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
BMP4P12644 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BMP4P12644 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BMP4P12644 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BMP4P12644 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.44■□□□□ 0.22
BMP4P12644 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BMP4P12644 AC091390.4-202ENST00000476426 537 ntBASIC16.44■□□□□ 0.22
BMP4P12644 CA15P1-201ENST00000481698 905 ntBASIC16.44■□□□□ 0.22
BMP4P12644 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.44■□□□□ 0.22
BMP4P12644 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.44■□□□□ 0.22
BMP4P12644 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
BMP4P12644 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms