Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
UBL4AP11441 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
UBL4AP11441 KRT89P-201ENST00000620027 1478 ntBASIC16.6■□□□□ 0.25
UBL4AP11441 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.6■□□□□ 0.25
UBL4AP11441 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
UBL4AP11441 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBL4AP11441 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.6■□□□□ 0.25
UBL4AP11441 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.59■□□□□ 0.25
UBL4AP11441 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.59■□□□□ 0.25
UBL4AP11441 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
UBL4AP11441 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.59■□□□□ 0.25
UBL4AP11441 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.59■□□□□ 0.25
UBL4AP11441 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 AC112907.2-201ENST00000448639 330 ntBASIC16.59■□□□□ 0.25
UBL4AP11441 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.59■□□□□ 0.25
UBL4AP11441 DUX4L26-201ENST00000489078 1255 ntBASIC16.59■□□□□ 0.25
UBL4AP11441 AC113404.2-201ENST00000507884 177 ntBASIC16.59■□□□□ 0.25
UBL4AP11441 KRT18P21-201ENST00000515767 1272 ntBASIC16.59■□□□□ 0.25
UBL4AP11441 AC022616.7-201ENST00000525383 220 ntBASIC16.59■□□□□ 0.25
UBL4AP11441 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
UBL4AP11441 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
UBL4AP11441 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
UBL4AP11441 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.59■□□□□ 0.25
UBL4AP11441 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
UBL4AP11441 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.59■□□□□ 0.25
UBL4AP11441 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.59■□□□□ 0.25
UBL4AP11441 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
UBL4AP11441 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.59■□□□□ 0.25
UBL4AP11441 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.59■□□□□ 0.25
UBL4AP11441 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
UBL4AP11441 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.59■□□□□ 0.25
UBL4AP11441 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBL4AP11441 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
UBL4AP11441 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBL4AP11441 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBL4AP11441 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBL4AP11441 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBL4AP11441 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBL4AP11441 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBL4AP11441 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.25
UBL4AP11441 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.58■□□□□ 0.25
UBL4AP11441 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBL4AP11441 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBL4AP11441 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBL4AP11441 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBL4AP11441 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBL4AP11441 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
UBL4AP11441 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.58■□□□□ 0.24
UBL4AP11441 KRT18P48-201ENST00000434763 852 ntBASIC16.58■□□□□ 0.24
UBL4AP11441 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.58■□□□□ 0.24
UBL4AP11441 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.58■□□□□ 0.24
UBL4AP11441 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.58■□□□□ 0.24
UBL4AP11441 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.58■□□□□ 0.24
UBL4AP11441 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.58■□□□□ 0.24
UBL4AP11441 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.58■□□□□ 0.24
UBL4AP11441 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
UBL4AP11441 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBL4AP11441 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
UBL4AP11441 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.57■□□□□ 0.24
UBL4AP11441 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBL4AP11441 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms