Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PF4V1P10720 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PF4V1P10720 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PF4V1P10720 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PF4V1P10720 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PF4V1P10720 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PF4V1P10720 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.21□□□□□ -0.14
PF4V1P10720 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PF4V1P10720 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PF4V1P10720 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PF4V1P10720 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PF4V1P10720 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PF4V1P10720 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PF4V1P10720 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PF4V1P10720 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.2□□□□□ -0.14
PF4V1P10720 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.2□□□□□ -0.14
PF4V1P10720 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 KRT89P-201ENST00000620027 1478 ntBASIC14.2□□□□□ -0.14
PF4V1P10720 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PF4V1P10720 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
PF4V1P10720 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PF4V1P10720 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 IGHGP-201ENST00000390555 1178 ntBASIC14.2□□□□□ -0.14
PF4V1P10720 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.2□□□□□ -0.14
PF4V1P10720 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
PF4V1P10720 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.2□□□□□ -0.14
PF4V1P10720 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.2□□□□□ -0.14
PF4V1P10720 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.2□□□□□ -0.14
PF4V1P10720 TPSP2-201ENST00000561760 610 ntBASIC14.2□□□□□ -0.14
PF4V1P10720 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.2□□□□□ -0.14
PF4V1P10720 AC138894.3-201ENST00000603787 634 ntBASIC14.2□□□□□ -0.14
PF4V1P10720 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.2□□□□□ -0.14
PF4V1P10720 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 AL020996.1-203ENST00000536896 2307 ntBASIC14.2□□□□□ -0.14
PF4V1P10720 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.2□□□□□ -0.14
PF4V1P10720 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PF4V1P10720 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PF4V1P10720 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
PF4V1P10720 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.19□□□□□ -0.14
PF4V1P10720 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.19□□□□□ -0.14
PF4V1P10720 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PF4V1P10720 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PF4V1P10720 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.19□□□□□ -0.14
PF4V1P10720 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.19□□□□□ -0.14
PF4V1P10720 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.19□□□□□ -0.14
PF4V1P10720 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.19□□□□□ -0.14
PF4V1P10720 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.19□□□□□ -0.14
PF4V1P10720 FOSL1P1-201ENST00000511041 816 ntBASIC14.19□□□□□ -0.14
PF4V1P10720 AC074051.2-201ENST00000565115 352 ntBASIC14.19□□□□□ -0.14
PF4V1P10720 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.19□□□□□ -0.14
PF4V1P10720 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.19□□□□□ -0.14
PF4V1P10720 AL390719.2-201ENST00000606993 987 ntBASIC14.19□□□□□ -0.14
PF4V1P10720 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PF4V1P10720 AC004263.2-201ENST00000617183 678 ntBASIC14.19□□□□□ -0.14
PF4V1P10720 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PF4V1P10720 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PF4V1P10720 AL353692.3-201ENST00000407031 1396 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms