Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.81■□□□□ 0.6
RARAP10276 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.81■□□□□ 0.6
RARAP10276 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RARAP10276 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RARAP10276 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.8■□□□□ 0.6
RARAP10276 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.8■□□□□ 0.6
RARAP10276 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RARAP10276 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
RARAP10276 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
RARAP10276 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.8■□□□□ 0.6
RARAP10276 RNF152P1-201ENST00000397754 604 ntBASIC18.8■□□□□ 0.6
RARAP10276 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 HLA-F-220ENST00000434407 884 ntBASIC18.8■□□□□ 0.6
RARAP10276 KRT18P38-201ENST00000449496 1282 ntBASIC18.8■□□□□ 0.6
RARAP10276 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.8■□□□□ 0.6
RARAP10276 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.8■□□□□ 0.6
RARAP10276 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
RARAP10276 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.8■□□□□ 0.6
RARAP10276 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.8■□□□□ 0.6
RARAP10276 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
RARAP10276 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
RARAP10276 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
RARAP10276 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.8■□□□□ 0.6
RARAP10276 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
RARAP10276 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 AC090340.1-201ENST00000620778 4980 ntBASIC18.8■□□□□ 0.6
RARAP10276 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RARAP10276 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RARAP10276 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.79■□□□□ 0.6
RARAP10276 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RARAP10276 AC100803.2-201ENST00000562459 1963 ntBASIC18.79■□□□□ 0.6
RARAP10276 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.79■□□□□ 0.6
RARAP10276 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.79■□□□□ 0.6
RARAP10276 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RARAP10276 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
RARAP10276 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.79■□□□□ 0.6
RARAP10276 AC104076.2-201ENST00000448912 469 ntBASIC18.79■□□□□ 0.6
RARAP10276 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 AC113404.2-201ENST00000507884 177 ntBASIC18.79■□□□□ 0.6
RARAP10276 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.79■□□□□ 0.6
RARAP10276 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RARAP10276 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.79■□□□□ 0.6
RARAP10276 AL355312.1-201ENST00000407115 2176 ntBASIC18.79■□□□□ 0.6
RARAP10276 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RARAP10276 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RARAP10276 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 KRT89P-201ENST00000620027 1478 ntBASIC18.78■□□□□ 0.6
RARAP10276 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.78■□□□□ 0.6
RARAP10276 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RARAP10276 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RARAP10276 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.78■□□□□ 0.6
RARAP10276 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.78■□□□□ 0.6
RARAP10276 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RARAP10276 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RARAP10276 AK4P3-201ENST00000418260 669 ntBASIC18.78■□□□□ 0.6
RARAP10276 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms