Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.89□□□□□ -0.03
CTSDP07339 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CTSDP07339 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.89□□□□□ -0.03
CTSDP07339 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.89□□□□□ -0.03
CTSDP07339 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CTSDP07339 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CTSDP07339 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.89□□□□□ -0.03
CTSDP07339 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.89□□□□□ -0.03
CTSDP07339 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CTSDP07339 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.88□□□□□ -0.03
CTSDP07339 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 MESTP1-201ENST00000404287 994 ntBASIC14.88□□□□□ -0.03
CTSDP07339 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.88□□□□□ -0.03
CTSDP07339 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.88□□□□□ -0.03
CTSDP07339 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.88□□□□□ -0.03
CTSDP07339 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.88□□□□□ -0.03
CTSDP07339 AC006058.3-201ENST00000606217 1069 ntBASIC14.88□□□□□ -0.03
CTSDP07339 LINC01451-201ENST00000623792 534 ntBASIC14.88□□□□□ -0.03
CTSDP07339 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CTSDP07339 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CTSDP07339 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CTSDP07339 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.88□□□□□ -0.03
CTSDP07339 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CTSDP07339 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CTSDP07339 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CTSDP07339 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.88□□□□□ -0.03
CTSDP07339 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CTSDP07339 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CTSDP07339 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.88□□□□□ -0.03
CTSDP07339 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CTSDP07339 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSDP07339 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CTSDP07339 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CTSDP07339 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.87□□□□□ -0.03
CTSDP07339 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CTSDP07339 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 AC132938.6-201ENST00000623828 1655 ntBASIC14.87□□□□□ -0.03
CTSDP07339 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
CTSDP07339 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.87□□□□□ -0.03
CTSDP07339 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CTSDP07339 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 MFAP1P1-201ENST00000442257 1255 ntBASIC14.87□□□□□ -0.03
CTSDP07339 TSPY20P-201ENST00000450910 630 ntBASIC14.87□□□□□ -0.03
CTSDP07339 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CTSDP07339 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.87□□□□□ -0.03
CTSDP07339 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.87□□□□□ -0.03
CTSDP07339 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.87□□□□□ -0.03
CTSDP07339 MIR3180-4-201ENST00000582223 153 ntBASIC14.87□□□□□ -0.03
CTSDP07339 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.87□□□□□ -0.03
CTSDP07339 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.87□□□□□ -0.03
CTSDP07339 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 CROCCP1-201ENST00000426910 5675 ntBASIC14.87□□□□□ -0.03
CTSDP07339 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms