Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPN1SWP03999 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
OPN1SWP03999 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.76■□□□□ 0.27
OPN1SWP03999 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
OPN1SWP03999 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPN1SWP03999 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPN1SWP03999 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPN1SWP03999 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPN1SWP03999 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPN1SWP03999 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
OPN1SWP03999 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
OPN1SWP03999 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPN1SWP03999 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPN1SWP03999 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
OPN1SWP03999 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.75■□□□□ 0.27
OPN1SWP03999 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.75■□□□□ 0.27
OPN1SWP03999 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
OPN1SWP03999 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.75■□□□□ 0.27
OPN1SWP03999 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
OPN1SWP03999 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.75■□□□□ 0.27
OPN1SWP03999 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.75■□□□□ 0.27
OPN1SWP03999 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.75■□□□□ 0.27
OPN1SWP03999 AC010653.2-201ENST00000623505 997 ntBASIC16.75■□□□□ 0.27
OPN1SWP03999 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
OPN1SWP03999 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
OPN1SWP03999 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPN1SWP03999 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.74■□□□□ 0.27
OPN1SWP03999 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.74■□□□□ 0.27
OPN1SWP03999 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 AL023806.1-201ENST00000603994 1649 ntBASIC16.74■□□□□ 0.27
OPN1SWP03999 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.74■□□□□ 0.27
OPN1SWP03999 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.74■□□□□ 0.27
OPN1SWP03999 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
OPN1SWP03999 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.74■□□□□ 0.27
OPN1SWP03999 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
OPN1SWP03999 KRT8P9-201ENST00000558927 1449 ntBASIC16.74■□□□□ 0.27
OPN1SWP03999 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.74■□□□□ 0.27
OPN1SWP03999 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.74■□□□□ 0.27
OPN1SWP03999 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.74■□□□□ 0.27
OPN1SWP03999 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.74■□□□□ 0.27
OPN1SWP03999 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.74■□□□□ 0.27
OPN1SWP03999 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.74■□□□□ 0.27
OPN1SWP03999 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.74■□□□□ 0.27
OPN1SWP03999 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
OPN1SWP03999 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
OPN1SWP03999 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.74■□□□□ 0.27
OPN1SWP03999 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.74■□□□□ 0.27
OPN1SWP03999 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.74■□□□□ 0.27
OPN1SWP03999 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
OPN1SWP03999 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
OPN1SWP03999 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
OPN1SWP03999 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
OPN1SWP03999 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.74■□□□□ 0.27
OPN1SWP03999 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms