Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.21□□□□□ -0.13
IFNA1P01562 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.21□□□□□ -0.13
IFNA1P01562 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.21□□□□□ -0.13
IFNA1P01562 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
IFNA1P01562 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IFNA1P01562 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.21□□□□□ -0.13
IFNA1P01562 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
IFNA1P01562 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
IFNA1P01562 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.21□□□□□ -0.13
IFNA1P01562 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.21□□□□□ -0.14
IFNA1P01562 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
IFNA1P01562 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
IFNA1P01562 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
IFNA1P01562 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
IFNA1P01562 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
IFNA1P01562 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
IFNA1P01562 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
IFNA1P01562 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
IFNA1P01562 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.2□□□□□ -0.14
IFNA1P01562 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
IFNA1P01562 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
IFNA1P01562 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 LINC01126-201ENST00000623515 1646 ntBASIC14.2□□□□□ -0.14
IFNA1P01562 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
IFNA1P01562 AL356309.3-201ENST00000624132 1934 ntBASIC14.2□□□□□ -0.14
IFNA1P01562 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.2□□□□□ -0.14
IFNA1P01562 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 CNN2P6-201ENST00000439038 900 ntBASIC14.2□□□□□ -0.14
IFNA1P01562 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.2□□□□□ -0.14
IFNA1P01562 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.2□□□□□ -0.14
IFNA1P01562 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.2□□□□□ -0.14
IFNA1P01562 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
IFNA1P01562 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.2□□□□□ -0.14
IFNA1P01562 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.2□□□□□ -0.14
IFNA1P01562 AC092437.1-201ENST00000624794 1048 ntBASIC14.2□□□□□ -0.14
IFNA1P01562 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.2□□□□□ -0.14
IFNA1P01562 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.2□□□□□ -0.14
IFNA1P01562 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
IFNA1P01562 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
IFNA1P01562 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFNA1P01562 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
IFNA1P01562 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
IFNA1P01562 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
IFNA1P01562 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.19□□□□□ -0.14
IFNA1P01562 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
IFNA1P01562 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.19□□□□□ -0.14
IFNA1P01562 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
IFNA1P01562 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.19□□□□□ -0.14
IFNA1P01562 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.19□□□□□ -0.14
IFNA1P01562 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
IFNA1P01562 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
IFNA1P01562 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IFNA1P01562 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.19□□□□□ -0.14
IFNA1P01562 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.19□□□□□ -0.14
IFNA1P01562 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.19□□□□□ -0.14
IFNA1P01562 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.19□□□□□ -0.14
IFNA1P01562 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms