Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TOMM40O96008 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
TOMM40O96008 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TOMM40O96008 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.06□□□□□ -0.16
TOMM40O96008 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.06□□□□□ -0.16
TOMM40O96008 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.06□□□□□ -0.16
TOMM40O96008 AL512604.3-201ENST00000569583 964 ntBASIC14.06□□□□□ -0.16
TOMM40O96008 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TOMM40O96008 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.06□□□□□ -0.16
TOMM40O96008 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.06□□□□□ -0.16
TOMM40O96008 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
TOMM40O96008 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TOMM40O96008 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.06□□□□□ -0.16
TOMM40O96008 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TOMM40O96008 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TOMM40O96008 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TOMM40O96008 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.06□□□□□ -0.16
TOMM40O96008 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.05□□□□□ -0.16
TOMM40O96008 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.05□□□□□ -0.16
TOMM40O96008 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
TOMM40O96008 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TOMM40O96008 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TOMM40O96008 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.05□□□□□ -0.16
TOMM40O96008 SNORA78-201ENST00000459373 127 ntBASIC14.05□□□□□ -0.16
TOMM40O96008 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.05□□□□□ -0.16
TOMM40O96008 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.05□□□□□ -0.16
TOMM40O96008 AL355075.4-201ENST00000554988 638 ntBASIC14.05□□□□□ -0.16
TOMM40O96008 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TOMM40O96008 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TOMM40O96008 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.05□□□□□ -0.16
TOMM40O96008 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
TOMM40O96008 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.05□□□□□ -0.16
TOMM40O96008 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.05□□□□□ -0.16
TOMM40O96008 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TOMM40O96008 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TOMM40O96008 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TOMM40O96008 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TOMM40O96008 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TOMM40O96008 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TOMM40O96008 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TOMM40O96008 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TOMM40O96008 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.04□□□□□ -0.16
TOMM40O96008 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TOMM40O96008 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TOMM40O96008 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TOMM40O96008 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TOMM40O96008 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.04□□□□□ -0.16
TOMM40O96008 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TOMM40O96008 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TOMM40O96008 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TOMM40O96008 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.04□□□□□ -0.16
TOMM40O96008 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TOMM40O96008 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TOMM40O96008 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TOMM40O96008 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.04□□□□□ -0.16
TOMM40O96008 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TOMM40O96008 AL645608.8-201ENST00000606034 2086 ntBASIC14.04□□□□□ -0.16
TOMM40O96008 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TOMM40O96008 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.04□□□□□ -0.16
TOMM40O96008 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.04□□□□□ -0.16
TOMM40O96008 DUTP2-201ENST00000519164 463 ntBASIC14.04□□□□□ -0.16
TOMM40O96008 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.04□□□□□ -0.16
TOMM40O96008 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.04□□□□□ -0.16
TOMM40O96008 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.04□□□□□ -0.16
TOMM40O96008 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms