Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBL3O95164 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.1■□□□□ 0.17
UBL3O95164 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UBL3O95164 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBL3O95164 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.1■□□□□ 0.17
UBL3O95164 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 FLJ13224-201ENST00000313737 1514 ntBASIC16.09■□□□□ 0.17
UBL3O95164 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.09■□□□□ 0.17
UBL3O95164 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
UBL3O95164 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.09■□□□□ 0.17
UBL3O95164 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.09■□□□□ 0.17
UBL3O95164 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
UBL3O95164 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.09■□□□□ 0.17
UBL3O95164 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.09■□□□□ 0.17
UBL3O95164 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.09■□□□□ 0.17
UBL3O95164 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.09■□□□□ 0.17
UBL3O95164 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.09■□□□□ 0.17
UBL3O95164 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.09■□□□□ 0.17
UBL3O95164 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.09■□□□□ 0.17
UBL3O95164 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
UBL3O95164 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.09■□□□□ 0.17
UBL3O95164 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.09■□□□□ 0.17
UBL3O95164 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.09■□□□□ 0.17
UBL3O95164 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBL3O95164 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
UBL3O95164 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
UBL3O95164 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBL3O95164 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.09■□□□□ 0.17
UBL3O95164 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBL3O95164 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
UBL3O95164 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.08■□□□□ 0.17
UBL3O95164 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UBL3O95164 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
UBL3O95164 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UBL3O95164 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UBL3O95164 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBL3O95164 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBL3O95164 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBL3O95164 STARP1-201ENST00000397973 869 ntBASIC16.08■□□□□ 0.16
UBL3O95164 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBL3O95164 AC104076.2-201ENST00000448912 469 ntBASIC16.08■□□□□ 0.16
UBL3O95164 DUX4L26-201ENST00000489078 1255 ntBASIC16.08■□□□□ 0.16
UBL3O95164 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.08■□□□□ 0.16
UBL3O95164 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBL3O95164 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBL3O95164 REXO1L9P-201ENST00000604264 2108 ntBASIC16.08■□□□□ 0.16
UBL3O95164 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
UBL3O95164 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBL3O95164 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBL3O95164 AD000864.1-201ENST00000624076 2295 ntBASIC16.08■□□□□ 0.16
UBL3O95164 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
UBL3O95164 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBL3O95164 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBL3O95164 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBL3O95164 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBL3O95164 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.08■□□□□ 0.16
UBL3O95164 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.08■□□□□ 0.16
UBL3O95164 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBL3O95164 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.08■□□□□ 0.16
UBL3O95164 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBL3O95164 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBL3O95164 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBL3O95164 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBL3O95164 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBL3O95164 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBL3O95164 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBL3O95164 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBL3O95164 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBL3O95164 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
UBL3O95164 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBL3O95164 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.07■□□□□ 0.16
UBL3O95164 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBL3O95164 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBL3O95164 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBL3O95164 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
UBL3O95164 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
UBL3O95164 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.07■□□□□ 0.16
UBL3O95164 RASA4DP-201ENST00000460726 1199 ntBASIC16.07■□□□□ 0.16
UBL3O95164 AC063952.2-201ENST00000498792 1227 ntBASIC16.07■□□□□ 0.16
UBL3O95164 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.07■□□□□ 0.16
UBL3O95164 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.07■□□□□ 0.16
UBL3O95164 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
UBL3O95164 AL157888.1-201ENST00000631930 593 ntBASIC16.07■□□□□ 0.16
UBL3O95164 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms