Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.79■□□□□ 0.6
BEST1O76090 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.79■□□□□ 0.6
BEST1O76090 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BEST1O76090 AC020763.4-201ENST00000623414 4170 ntBASIC18.78■□□□□ 0.6
BEST1O76090 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST1O76090 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST1O76090 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BEST1O76090 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST1O76090 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BEST1O76090 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.78■□□□□ 0.6
BEST1O76090 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST1O76090 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.78■□□□□ 0.6
BEST1O76090 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST1O76090 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.78■□□□□ 0.6
BEST1O76090 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.78■□□□□ 0.6
BEST1O76090 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
BEST1O76090 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BEST1O76090 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.78■□□□□ 0.6
BEST1O76090 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST1O76090 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST1O76090 AKR1C7P-201ENST00000305623 895 ntBASIC18.78■□□□□ 0.6
BEST1O76090 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BEST1O76090 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.78■□□□□ 0.6
BEST1O76090 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.78■□□□□ 0.6
BEST1O76090 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BEST1O76090 AL591684.3-201ENST00000605187 298 ntBASIC18.78■□□□□ 0.6
BEST1O76090 AL691432.3-201ENST00000621860 400 ntBASIC18.78■□□□□ 0.6
BEST1O76090 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST1O76090 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.78■□□□□ 0.6
BEST1O76090 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST1O76090 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST1O76090 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
BEST1O76090 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BEST1O76090 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST1O76090 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BEST1O76090 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.77■□□□□ 0.6
BEST1O76090 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
BEST1O76090 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.77■□□□□ 0.6
BEST1O76090 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST1O76090 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST1O76090 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BEST1O76090 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST1O76090 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST1O76090 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST1O76090 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
BEST1O76090 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
BEST1O76090 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.77■□□□□ 0.6
BEST1O76090 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.77■□□□□ 0.6
BEST1O76090 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BEST1O76090 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.77■□□□□ 0.6
BEST1O76090 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST1O76090 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
BEST1O76090 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.77■□□□□ 0.6
BEST1O76090 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.77■□□□□ 0.6
BEST1O76090 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.77■□□□□ 0.6
BEST1O76090 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.77■□□□□ 0.6
BEST1O76090 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.77■□□□□ 0.6
BEST1O76090 AC111152.3-201ENST00000569699 673 ntBASIC18.77■□□□□ 0.6
BEST1O76090 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.77■□□□□ 0.6
BEST1O76090 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
BEST1O76090 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.77■□□□□ 0.6
BEST1O76090 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BEST1O76090 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST1O76090 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST1O76090 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BEST1O76090 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
BEST1O76090 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
BEST1O76090 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
BEST1O76090 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
BEST1O76090 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.76■□□□□ 0.59
BEST1O76090 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.76■□□□□ 0.59
BEST1O76090 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST1O76090 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BEST1O76090 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BEST1O76090 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.76■□□□□ 0.59
BEST1O76090 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.76■□□□□ 0.59
BEST1O76090 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST1O76090 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
BEST1O76090 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.76■□□□□ 0.59
BEST1O76090 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BEST1O76090 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST1O76090 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.76■□□□□ 0.59
BEST1O76090 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BEST1O76090 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST1O76090 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
BEST1O76090 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.76■□□□□ 0.59
BEST1O76090 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.76■□□□□ 0.59
BEST1O76090 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.76■□□□□ 0.59
BEST1O76090 AC132008.2-207ENST00000454517 770 ntBASIC18.76■□□□□ 0.59
BEST1O76090 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST1O76090 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.76■□□□□ 0.59
BEST1O76090 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST1O76090 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST1O76090 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.76■□□□□ 0.59
BEST1O76090 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST1O76090 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST1O76090 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.76■□□□□ 0.59
BEST1O76090 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
BEST1O76090 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms