Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH4O75427 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.64■□□□□ 0.57
LRCH4O75427 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.64■□□□□ 0.57
LRCH4O75427 AC068472.1-201ENST00000474589 881 ntBASIC18.64■□□□□ 0.57
LRCH4O75427 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.64■□□□□ 0.57
LRCH4O75427 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.64■□□□□ 0.57
LRCH4O75427 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.64■□□□□ 0.57
LRCH4O75427 AC116407.2-201ENST00000613639 860 ntBASIC18.64■□□□□ 0.57
LRCH4O75427 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.64■□□□□ 0.57
LRCH4O75427 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LRCH4O75427 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.64■□□□□ 0.57
LRCH4O75427 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.64■□□□□ 0.57
LRCH4O75427 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.64■□□□□ 0.57
LRCH4O75427 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH4O75427 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH4O75427 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH4O75427 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
LRCH4O75427 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH4O75427 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRCH4O75427 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.64■□□□□ 0.57
LRCH4O75427 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.64■□□□□ 0.57
LRCH4O75427 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH4O75427 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH4O75427 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.63■□□□□ 0.57
LRCH4O75427 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.63■□□□□ 0.57
LRCH4O75427 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH4O75427 LINC00304-203ENST00000565008 1864 ntBASIC18.63■□□□□ 0.57
LRCH4O75427 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH4O75427 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH4O75427 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH4O75427 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH4O75427 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH4O75427 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRCH4O75427 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.63■□□□□ 0.57
LRCH4O75427 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.63■□□□□ 0.57
LRCH4O75427 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LRCH4O75427 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.63■□□□□ 0.57
LRCH4O75427 MTCL1P1-201ENST00000446207 792 ntBASIC18.63■□□□□ 0.57
LRCH4O75427 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH4O75427 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRCH4O75427 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.63■□□□□ 0.57
LRCH4O75427 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH4O75427 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LRCH4O75427 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRCH4O75427 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH4O75427 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.63■□□□□ 0.57
LRCH4O75427 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.63■□□□□ 0.57
LRCH4O75427 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH4O75427 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
LRCH4O75427 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH4O75427 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH4O75427 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.63■□□□□ 0.57
LRCH4O75427 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH4O75427 REXO1L11P-201ENST00000620964 1927 ntBASIC18.62■□□□□ 0.57
LRCH4O75427 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.62■□□□□ 0.57
LRCH4O75427 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRCH4O75427 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH4O75427 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LRCH4O75427 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.62■□□□□ 0.57
LRCH4O75427 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH4O75427 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH4O75427 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.62■□□□□ 0.57
LRCH4O75427 DDX43P3-201ENST00000441064 443 ntBASIC18.62■□□□□ 0.57
LRCH4O75427 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH4O75427 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.62■□□□□ 0.57
LRCH4O75427 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH4O75427 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.62■□□□□ 0.57
LRCH4O75427 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH4O75427 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.62■□□□□ 0.57
LRCH4O75427 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH4O75427 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH4O75427 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH4O75427 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LRCH4O75427 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
LRCH4O75427 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH4O75427 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRCH4O75427 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH4O75427 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.62■□□□□ 0.57
LRCH4O75427 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH4O75427 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.62■□□□□ 0.57
LRCH4O75427 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
LRCH4O75427 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LRCH4O75427 FZD10-202ENST00000539839 3282 ntBASIC18.61■□□□□ 0.57
LRCH4O75427 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LRCH4O75427 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH4O75427 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH4O75427 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH4O75427 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.61■□□□□ 0.57
LRCH4O75427 AC133963.1-201ENST00000504166 1679 ntBASIC18.61■□□□□ 0.57
LRCH4O75427 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.61■□□□□ 0.57
LRCH4O75427 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH4O75427 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.61■□□□□ 0.57
LRCH4O75427 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH4O75427 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.61■□□□□ 0.57
LRCH4O75427 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.61■□□□□ 0.57
LRCH4O75427 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH4O75427 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.61■□□□□ 0.57
LRCH4O75427 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.61■□□□□ 0.57
LRCH4O75427 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
LRCH4O75427 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms