Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH16O75309 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH16O75309 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH16O75309 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH16O75309 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH16O75309 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH16O75309 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH16O75309 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CDH16O75309 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH16O75309 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH16O75309 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH16O75309 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH16O75309 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH16O75309 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH16O75309 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH16O75309 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.11■□□□□ 0.49
CDH16O75309 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH16O75309 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH16O75309 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH16O75309 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH16O75309 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH16O75309 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.11■□□□□ 0.49
CDH16O75309 AL359736.2-201ENST00000621992 437 ntBASIC18.11■□□□□ 0.49
CDH16O75309 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH16O75309 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH16O75309 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH16O75309 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDH16O75309 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH16O75309 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH16O75309 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH16O75309 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH16O75309 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDH16O75309 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDH16O75309 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH16O75309 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CDH16O75309 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CDH16O75309 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH16O75309 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH16O75309 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH16O75309 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDH16O75309 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH16O75309 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH16O75309 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH16O75309 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH16O75309 AC098590.1-201ENST00000468126 897 ntBASIC18.1■□□□□ 0.49
CDH16O75309 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH16O75309 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH16O75309 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH16O75309 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH16O75309 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDH16O75309 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDH16O75309 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CDH16O75309 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH16O75309 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH16O75309 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CDH16O75309 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CDH16O75309 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH16O75309 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDH16O75309 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH16O75309 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDH16O75309 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH16O75309 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH16O75309 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 AL158047.1-201ENST00000445918 881 ntBASIC18.09■□□□□ 0.49
CDH16O75309 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CDH16O75309 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.09■□□□□ 0.49
CDH16O75309 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH16O75309 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH16O75309 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDH16O75309 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDH16O75309 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH16O75309 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms