Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF4O60810 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
PRAMEF4O60810 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEF4O60810 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PRAMEF4O60810 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.22■□□□□ 0.35
PRAMEF4O60810 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEF4O60810 AL049597.2-201ENST00000565575 961 ntBASIC17.22■□□□□ 0.35
PRAMEF4O60810 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEF4O60810 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PRAMEF4O60810 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.22■□□□□ 0.35
PRAMEF4O60810 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEF4O60810 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF4O60810 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.21■□□□□ 0.35
PRAMEF4O60810 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PRAMEF4O60810 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF4O60810 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF4O60810 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF4O60810 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF4O60810 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF4O60810 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF4O60810 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.21■□□□□ 0.35
PRAMEF4O60810 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF4O60810 LINC00304-203ENST00000565008 1864 ntBASIC17.21■□□□□ 0.35
PRAMEF4O60810 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.21■□□□□ 0.35
PRAMEF4O60810 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF4O60810 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF4O60810 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF4O60810 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.21■□□□□ 0.35
PRAMEF4O60810 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEF4O60810 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEF4O60810 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.21■□□□□ 0.35
PRAMEF4O60810 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.21■□□□□ 0.35
PRAMEF4O60810 LINC01238-205ENST00000567549 1107 ntBASIC17.21■□□□□ 0.35
PRAMEF4O60810 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEF4O60810 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF4O60810 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEF4O60810 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.21■□□□□ 0.35
PRAMEF4O60810 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF4O60810 AC139713.2-201ENST00000641328 2723 ntBASIC17.21■□□□□ 0.35
PRAMEF4O60810 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF4O60810 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF4O60810 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEF4O60810 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PRAMEF4O60810 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF4O60810 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PRAMEF4O60810 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.34
PRAMEF4O60810 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.2■□□□□ 0.34
PRAMEF4O60810 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF4O60810 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PRAMEF4O60810 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PRAMEF4O60810 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF4O60810 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF4O60810 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF4O60810 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF4O60810 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF4O60810 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF4O60810 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF4O60810 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF4O60810 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF4O60810 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PRAMEF4O60810 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF4O60810 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF4O60810 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PRAMEF4O60810 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF4O60810 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF4O60810 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF4O60810 AL845331.1-201ENST00000424978 1190 ntBASIC17.2■□□□□ 0.34
PRAMEF4O60810 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF4O60810 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF4O60810 RN7SL606P-201ENST00000472779 293 ntBASIC17.2■□□□□ 0.34
PRAMEF4O60810 FAM86EP-206ENST00000510506 987 ntBASIC17.2■□□□□ 0.34
PRAMEF4O60810 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.2■□□□□ 0.34
PRAMEF4O60810 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
PRAMEF4O60810 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
PRAMEF4O60810 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF4O60810 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.2■□□□□ 0.34
PRAMEF4O60810 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF4O60810 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF4O60810 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.2■□□□□ 0.34
PRAMEF4O60810 AC005332.1-201ENST00000577698 1310 ntBASIC17.2■□□□□ 0.34
PRAMEF4O60810 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF4O60810 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF4O60810 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PRAMEF4O60810 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF4O60810 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms