Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.65■□□□□ 0.42
SNX3O60493 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX3O60493 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.65■□□□□ 0.42
SNX3O60493 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.65■□□□□ 0.42
SNX3O60493 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.65■□□□□ 0.42
SNX3O60493 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX3O60493 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX3O60493 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.65■□□□□ 0.42
SNX3O60493 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX3O60493 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNX3O60493 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
SNX3O60493 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SNX3O60493 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNX3O60493 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.64■□□□□ 0.42
SNX3O60493 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SNX3O60493 LINC00554-201ENST00000564841 3011 ntBASIC17.64■□□□□ 0.41
SNX3O60493 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.64■□□□□ 0.41
SNX3O60493 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 AC006449.5-201ENST00000610658 2098 ntBASIC17.64■□□□□ 0.41
SNX3O60493 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.41
SNX3O60493 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX3O60493 MCCD1P1-208ENST00000445732 328 ntBASIC17.64■□□□□ 0.41
SNX3O60493 AC097658.1-201ENST00000475555 843 ntBASIC17.64■□□□□ 0.41
SNX3O60493 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SNX3O60493 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.64■□□□□ 0.41
SNX3O60493 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.64■□□□□ 0.41
SNX3O60493 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SNX3O60493 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.64■□□□□ 0.41
SNX3O60493 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.64■□□□□ 0.41
SNX3O60493 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.64■□□□□ 0.41
SNX3O60493 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX3O60493 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
SNX3O60493 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 PKD1P1-201ENST00000458669 6805 ntBASIC17.64■□□□□ 0.41
SNX3O60493 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX3O60493 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SNX3O60493 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
SNX3O60493 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX3O60493 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SNX3O60493 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX3O60493 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.63■□□□□ 0.41
SNX3O60493 MST1L-201ENST00000442552 2185 ntBASIC17.63■□□□□ 0.41
SNX3O60493 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.63■□□□□ 0.41
SNX3O60493 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SNX3O60493 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SNX3O60493 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX3O60493 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX3O60493 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SNX3O60493 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
SNX3O60493 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.63■□□□□ 0.41
SNX3O60493 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SNX3O60493 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 AC132938.6-201ENST00000623828 1655 ntBASIC17.63■□□□□ 0.41
SNX3O60493 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SNX3O60493 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SNX3O60493 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SNX3O60493 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX3O60493 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.63■□□□□ 0.41
SNX3O60493 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.63■□□□□ 0.41
SNX3O60493 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX3O60493 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms