Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.69■■□□□ 1.06
GRIN3BO60391 IGHV3-42-201ENST00000520410 361 ntBASIC21.69■■□□□ 1.06
GRIN3BO60391 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.69■■□□□ 1.06
GRIN3BO60391 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.69■■□□□ 1.06
GRIN3BO60391 AL390754.1-201ENST00000619088 582 ntBASIC21.69■■□□□ 1.06
GRIN3BO60391 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GRIN3BO60391 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
GRIN3BO60391 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.69■■□□□ 1.06
GRIN3BO60391 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.69■■□□□ 1.06
GRIN3BO60391 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
GRIN3BO60391 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
GRIN3BO60391 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.69■■□□□ 1.06
GRIN3BO60391 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GRIN3BO60391 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GRIN3BO60391 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GRIN3BO60391 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GRIN3BO60391 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
GRIN3BO60391 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.68■■□□□ 1.06
GRIN3BO60391 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.68■■□□□ 1.06
GRIN3BO60391 CXCL1P1-201ENST00000502804 216 ntBASIC21.68■■□□□ 1.06
GRIN3BO60391 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.68■■□□□ 1.06
GRIN3BO60391 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.68■■□□□ 1.06
GRIN3BO60391 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GRIN3BO60391 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GRIN3BO60391 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GRIN3BO60391 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.68■■□□□ 1.06
GRIN3BO60391 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.68■■□□□ 1.06
GRIN3BO60391 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
GRIN3BO60391 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GRIN3BO60391 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
GRIN3BO60391 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GRIN3BO60391 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 SLC25A24-204ENST00000569674 2357 ntBASIC21.67■■□□□ 1.06
GRIN3BO60391 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.67■■□□□ 1.06
GRIN3BO60391 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.67■■□□□ 1.06
GRIN3BO60391 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.67■■□□□ 1.06
GRIN3BO60391 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.67■■□□□ 1.06
GRIN3BO60391 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.67■■□□□ 1.06
GRIN3BO60391 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 AC006116.8-202ENST00000587620 1550 ntBASIC21.67■■□□□ 1.06
GRIN3BO60391 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
GRIN3BO60391 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
GRIN3BO60391 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC21.67■■□□□ 1.06
GRIN3BO60391 GPR53P-205ENST00000457298 1084 ntBASIC21.67■■□□□ 1.06
GRIN3BO60391 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.67■■□□□ 1.06
GRIN3BO60391 IGHV3-71-201ENST00000523324 359 ntBASIC21.67■■□□□ 1.06
GRIN3BO60391 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
GRIN3BO60391 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.67■■□□□ 1.06
GRIN3BO60391 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GRIN3BO60391 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.67■■□□□ 1.06
GRIN3BO60391 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GRIN3BO60391 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.66■■□□□ 1.06
GRIN3BO60391 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GRIN3BO60391 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GRIN3BO60391 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GRIN3BO60391 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GRIN3BO60391 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GRIN3BO60391 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GRIN3BO60391 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GRIN3BO60391 AC002056.1-201ENST00000395613 760 ntBASIC21.66■■□□□ 1.06
GRIN3BO60391 PTCHD3P3-201ENST00000403073 906 ntBASIC21.66■■□□□ 1.06
GRIN3BO60391 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
GRIN3BO60391 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.66■■□□□ 1.06
GRIN3BO60391 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GRIN3BO60391 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.66■■□□□ 1.06
GRIN3BO60391 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.66■■□□□ 1.06
GRIN3BO60391 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.66■■□□□ 1.06
GRIN3BO60391 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.66■■□□□ 1.06
GRIN3BO60391 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GRIN3BO60391 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.66■■□□□ 1.06
GRIN3BO60391 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
GRIN3BO60391 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
GRIN3BO60391 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
GRIN3BO60391 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
GRIN3BO60391 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.65■■□□□ 1.06
GRIN3BO60391 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.65■■□□□ 1.06
GRIN3BO60391 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms