Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AL163051.1-201ENST00000569214 1512 ntBASIC16.91■□□□□ 0.3
URB1O60287 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
URB1O60287 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.91■□□□□ 0.3
URB1O60287 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
URB1O60287 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 MKNK2P1-201ENST00000437526 628 ntBASIC16.91■□□□□ 0.3
URB1O60287 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.91■□□□□ 0.3
URB1O60287 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.91■□□□□ 0.3
URB1O60287 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
URB1O60287 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
URB1O60287 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
URB1O60287 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
URB1O60287 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
URB1O60287 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
URB1O60287 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.9■□□□□ 0.3
URB1O60287 KRT18P27-201ENST00000427733 1299 ntBASIC16.9■□□□□ 0.3
URB1O60287 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
URB1O60287 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.9■□□□□ 0.3
URB1O60287 AL035252.4-201ENST00000624174 288 ntBASIC16.9■□□□□ 0.3
URB1O60287 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
URB1O60287 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
URB1O60287 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
URB1O60287 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
URB1O60287 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
URB1O60287 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.9■□□□□ 0.3
URB1O60287 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.9■□□□□ 0.3
URB1O60287 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
URB1O60287 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
URB1O60287 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
URB1O60287 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
URB1O60287 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
URB1O60287 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
URB1O60287 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
URB1O60287 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.9■□□□□ 0.3
URB1O60287 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.9■□□□□ 0.3
URB1O60287 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.9■□□□□ 0.3
URB1O60287 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
URB1O60287 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
URB1O60287 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
URB1O60287 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
URB1O60287 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
URB1O60287 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.89■□□□□ 0.3
URB1O60287 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
URB1O60287 AC004817.3-201ENST00000602957 2129 ntBASIC16.89■□□□□ 0.29
URB1O60287 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.89■□□□□ 0.29
URB1O60287 AC125634.1-201ENST00000438758 1403 ntBASIC16.89■□□□□ 0.29
URB1O60287 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.89■□□□□ 0.29
URB1O60287 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.89■□□□□ 0.29
URB1O60287 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.89■□□□□ 0.29
URB1O60287 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.89■□□□□ 0.29
URB1O60287 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.89■□□□□ 0.29
URB1O60287 AC136632.2-201ENST00000512891 861 ntBASIC16.89■□□□□ 0.29
URB1O60287 AC190387.1-201ENST00000551683 408 ntBASIC16.89■□□□□ 0.29
URB1O60287 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.89■□□□□ 0.29
URB1O60287 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.89■□□□□ 0.29
URB1O60287 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.89■□□□□ 0.29
URB1O60287 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
URB1O60287 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.89■□□□□ 0.29
URB1O60287 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.89■□□□□ 0.29
URB1O60287 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.89■□□□□ 0.29
URB1O60287 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.89■□□□□ 0.29
URB1O60287 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.89■□□□□ 0.29
URB1O60287 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.89■□□□□ 0.29
URB1O60287 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
URB1O60287 ELL2P1-201ENST00000413990 1906 ntBASIC16.89■□□□□ 0.29
URB1O60287 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
URB1O60287 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.88■□□□□ 0.29
URB1O60287 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.88■□□□□ 0.29
URB1O60287 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
URB1O60287 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
URB1O60287 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
URB1O60287 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
URB1O60287 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
URB1O60287 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms