Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 AC018445.3-201ENST00000624177 1945 ntBASIC17.13■□□□□ 0.33
DUX1O43812 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 AL096828.2-201ENST00000567259 1965 ntBASIC17.13■□□□□ 0.33
DUX1O43812 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
DUX1O43812 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DUX1O43812 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.12■□□□□ 0.33
DUX1O43812 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUX1O43812 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DUX1O43812 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DUX1O43812 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUX1O43812 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DUX1O43812 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.12■□□□□ 0.33
DUX1O43812 AC010460.3-201ENST00000511359 1579 ntBASIC17.12■□□□□ 0.33
DUX1O43812 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.12■□□□□ 0.33
DUX1O43812 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DUX1O43812 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DUX1O43812 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
DUX1O43812 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
DUX1O43812 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
DUX1O43812 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
DUX1O43812 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DUX1O43812 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.12■□□□□ 0.33
DUX1O43812 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.12■□□□□ 0.33
DUX1O43812 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.12■□□□□ 0.33
DUX1O43812 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.12■□□□□ 0.33
DUX1O43812 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.12■□□□□ 0.33
DUX1O43812 AP000867.4-201ENST00000641616 219 ntBASIC17.12■□□□□ 0.33
DUX1O43812 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.12■□□□□ 0.33
DUX1O43812 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.12■□□□□ 0.33
DUX1O43812 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUX1O43812 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
DUX1O43812 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUX1O43812 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
DUX1O43812 AC243591.1-201ENST00000452967 1364 ntBASIC17.12■□□□□ 0.33
DUX1O43812 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUX1O43812 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUX1O43812 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DUX1O43812 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DUX1O43812 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DUX1O43812 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.12■□□□□ 0.33
DUX1O43812 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.11■□□□□ 0.33
DUX1O43812 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
DUX1O43812 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
DUX1O43812 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.11■□□□□ 0.33
DUX1O43812 RPS2P1-201ENST00000434010 821 ntBASIC17.11■□□□□ 0.33
DUX1O43812 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.11■□□□□ 0.33
DUX1O43812 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.11■□□□□ 0.33
DUX1O43812 SLC25A1P1-201ENST00000528351 927 ntBASIC17.11■□□□□ 0.33
DUX1O43812 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.11■□□□□ 0.33
DUX1O43812 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.11■□□□□ 0.33
DUX1O43812 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.11■□□□□ 0.33
DUX1O43812 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 AL049840.3-201ENST00000602669 611 ntBASIC17.11■□□□□ 0.33
DUX1O43812 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.11■□□□□ 0.33
DUX1O43812 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
DUX1O43812 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
DUX1O43812 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
DUX1O43812 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.11■□□□□ 0.33
DUX1O43812 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.11■□□□□ 0.33
DUX1O43812 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
DUX1O43812 HTR7P1-202ENST00000624664 4411 ntBASIC17.11■□□□□ 0.33
DUX1O43812 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.11■□□□□ 0.33
DUX1O43812 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.11■□□□□ 0.33
DUX1O43812 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
DUX1O43812 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DUX1O43812 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX1O43812 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX1O43812 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DUX1O43812 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DUX1O43812 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX1O43812 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX1O43812 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DUX1O43812 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DUX1O43812 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DUX1O43812 AC103564.2-201ENST00000432853 1299 ntBASIC17.1■□□□□ 0.33
DUX1O43812 HNRNPDP1-201ENST00000439535 754 ntBASIC17.1■□□□□ 0.33
DUX1O43812 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.1■□□□□ 0.33
DUX1O43812 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms