Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.82□□□□□ -0.36
PAX4O43316 AC135776.1-201ENST00000319817 2481 ntBASIC12.82□□□□□ -0.36
PAX4O43316 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
PAX4O43316 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
PAX4O43316 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
PAX4O43316 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC12.82□□□□□ -0.36
PAX4O43316 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PAX4O43316 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.82□□□□□ -0.36
PAX4O43316 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.82□□□□□ -0.36
PAX4O43316 DUX4L26-201ENST00000489078 1255 ntBASIC12.82□□□□□ -0.36
PAX4O43316 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.82□□□□□ -0.36
PAX4O43316 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.82□□□□□ -0.36
PAX4O43316 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.82□□□□□ -0.36
PAX4O43316 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.82□□□□□ -0.36
PAX4O43316 AL136038.4-201ENST00000603606 1261 ntBASIC12.82□□□□□ -0.36
PAX4O43316 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.82□□□□□ -0.36
PAX4O43316 MADD-208ENST00000405573 1823 ntTSL 5 BASIC12.82□□□□□ -0.36
PAX4O43316 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.82□□□□□ -0.36
PAX4O43316 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PAX4O43316 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PAX4O43316 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
PAX4O43316 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PAX4O43316 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PAX4O43316 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
PAX4O43316 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
PAX4O43316 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC12.81□□□□□ -0.36
PAX4O43316 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.81□□□□□ -0.36
PAX4O43316 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.81□□□□□ -0.36
PAX4O43316 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
PAX4O43316 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
PAX4O43316 AL049597.2-201ENST00000565575 961 ntBASIC12.81□□□□□ -0.36
PAX4O43316 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.81□□□□□ -0.36
PAX4O43316 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.81□□□□□ -0.36
PAX4O43316 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
PAX4O43316 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 ABALON-201ENST00000629058 1903 ntBASIC12.81□□□□□ -0.36
PAX4O43316 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
PAX4O43316 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.81□□□□□ -0.36
PAX4O43316 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.81□□□□□ -0.36
PAX4O43316 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 AC135050.7-201ENST00000624508 2218 ntBASIC12.81□□□□□ -0.36
PAX4O43316 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
PAX4O43316 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
PAX4O43316 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.81□□□□□ -0.36
PAX4O43316 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PAX4O43316 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
PAX4O43316 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
PAX4O43316 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.8□□□□□ -0.36
PAX4O43316 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
PAX4O43316 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.8□□□□□ -0.36
PAX4O43316 F11R-206ENST00000621309 4770 ntTSL 5 BASIC12.8□□□□□ -0.36
PAX4O43316 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PAX4O43316 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC12.8□□□□□ -0.36
PAX4O43316 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
PAX4O43316 BICD1-207ENST00000551848 1962 ntBASIC12.8□□□□□ -0.36
PAX4O43316 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms