Protein–RNA interactions for Protein: O43312

MTSS1, Metastasis suppressor protein 1, humanhuman

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTSS1O43312 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
MTSS1O43312 AC012317.2-201ENST00000623305 2251 ntBASIC18.32■□□□□ 0.52
MTSS1O43312 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.32■□□□□ 0.52
MTSS1O43312 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
MTSS1O43312 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.32■□□□□ 0.52
MTSS1O43312 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.32■□□□□ 0.52
MTSS1O43312 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.32■□□□□ 0.52
MTSS1O43312 DUX4L26-201ENST00000489078 1255 ntBASIC18.32■□□□□ 0.52
MTSS1O43312 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.32■□□□□ 0.52
MTSS1O43312 NTF6B-201ENST00000591913 560 ntBASIC18.32■□□□□ 0.52
MTSS1O43312 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.32■□□□□ 0.52
MTSS1O43312 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
MTSS1O43312 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.32■□□□□ 0.52
MTSS1O43312 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 PCDHB18P-201ENST00000524813 2368 ntBASIC18.32■□□□□ 0.52
MTSS1O43312 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MTSS1O43312 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
MTSS1O43312 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.32■□□□□ 0.52
MTSS1O43312 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
MTSS1O43312 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MTSS1O43312 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.32■□□□□ 0.52
MTSS1O43312 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.31■□□□□ 0.52
MTSS1O43312 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.31■□□□□ 0.52
MTSS1O43312 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.31■□□□□ 0.52
MTSS1O43312 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.31■□□□□ 0.52
MTSS1O43312 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MTSS1O43312 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.31■□□□□ 0.52
MTSS1O43312 DDX43P3-201ENST00000441064 443 ntBASIC18.31■□□□□ 0.52
MTSS1O43312 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.31■□□□□ 0.52
MTSS1O43312 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.31■□□□□ 0.52
MTSS1O43312 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.31■□□□□ 0.52
MTSS1O43312 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.31■□□□□ 0.52
MTSS1O43312 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
MTSS1O43312 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.31■□□□□ 0.52
MTSS1O43312 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
MTSS1O43312 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.31■□□□□ 0.52
MTSS1O43312 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
MTSS1O43312 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
MTSS1O43312 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
MTSS1O43312 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.31■□□□□ 0.52
MTSS1O43312 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MTSS1O43312 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.31■□□□□ 0.52
MTSS1O43312 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.31■□□□□ 0.52
MTSS1O43312 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.31■□□□□ 0.52
MTSS1O43312 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTSS1O43312 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
MTSS1O43312 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTSS1O43312 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTSS1O43312 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
MTSS1O43312 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTSS1O43312 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTSS1O43312 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MTSS1O43312 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.3■□□□□ 0.52
MTSS1O43312 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MTSS1O43312 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MTSS1O43312 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MTSS1O43312 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.3■□□□□ 0.52
MTSS1O43312 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.3■□□□□ 0.52
MTSS1O43312 AL671277.2-201ENST00000458060 996 ntBASIC18.3■□□□□ 0.52
MTSS1O43312 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.3■□□□□ 0.52
MTSS1O43312 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.3■□□□□ 0.52
MTSS1O43312 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
MTSS1O43312 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.3■□□□□ 0.52
MTSS1O43312 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.3■□□□□ 0.52
MTSS1O43312 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
MTSS1O43312 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MTSS1O43312 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MTSS1O43312 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.3■□□□□ 0.52
MTSS1O43312 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MTSS1O43312 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms