Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC3O15379 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.45■□□□□ 0.38
HDAC3O15379 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC3O15379 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HDAC3O15379 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.45■□□□□ 0.38
HDAC3O15379 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC3O15379 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC3O15379 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC3O15379 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.45■□□□□ 0.38
HDAC3O15379 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HDAC3O15379 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.45■□□□□ 0.38
HDAC3O15379 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.45■□□□□ 0.38
HDAC3O15379 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC3O15379 AC010240.3-201ENST00000607688 395 ntBASIC17.45■□□□□ 0.38
HDAC3O15379 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC3O15379 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC3O15379 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC3O15379 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HDAC3O15379 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC3O15379 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC3O15379 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.45■□□□□ 0.38
HDAC3O15379 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.45■□□□□ 0.38
HDAC3O15379 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC3O15379 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC3O15379 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC3O15379 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC3O15379 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC3O15379 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.44■□□□□ 0.38
HDAC3O15379 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.44■□□□□ 0.38
HDAC3O15379 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC3O15379 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.44■□□□□ 0.38
HDAC3O15379 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC3O15379 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC3O15379 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC3O15379 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC3O15379 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC3O15379 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC3O15379 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC3O15379 TNRC18P3-201ENST00000441896 2691 ntBASIC17.44■□□□□ 0.38
HDAC3O15379 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC3O15379 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC3O15379 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.44■□□□□ 0.38
HDAC3O15379 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.44■□□□□ 0.38
HDAC3O15379 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.44■□□□□ 0.38
HDAC3O15379 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.44■□□□□ 0.38
HDAC3O15379 LINC01451-201ENST00000623792 534 ntBASIC17.44■□□□□ 0.38
HDAC3O15379 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.44■□□□□ 0.38
HDAC3O15379 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC3O15379 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.44■□□□□ 0.38
HDAC3O15379 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC3O15379 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC3O15379 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC3O15379 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.43■□□□□ 0.38
HDAC3O15379 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HDAC3O15379 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.43■□□□□ 0.38
HDAC3O15379 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.43■□□□□ 0.38
HDAC3O15379 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.43■□□□□ 0.38
HDAC3O15379 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.43■□□□□ 0.38
HDAC3O15379 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.43■□□□□ 0.38
HDAC3O15379 MIR4651-201ENST00000582622 73 ntBASIC17.43■□□□□ 0.38
HDAC3O15379 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.43■□□□□ 0.38
HDAC3O15379 AC008687.5-201ENST00000593746 558 ntBASIC17.43■□□□□ 0.38
HDAC3O15379 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.43■□□□□ 0.38
HDAC3O15379 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HDAC3O15379 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.43■□□□□ 0.38
HDAC3O15379 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.43■□□□□ 0.38
HDAC3O15379 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HDAC3O15379 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HDAC3O15379 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC3O15379 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
HDAC3O15379 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.43■□□□□ 0.38
HDAC3O15379 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HDAC3O15379 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HDAC3O15379 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.42■□□□□ 0.38
HDAC3O15379 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.42■□□□□ 0.38
HDAC3O15379 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HDAC3O15379 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.42■□□□□ 0.38
HDAC3O15379 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDAC3O15379 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms