Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SPTLC1O15269 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SPTLC1O15269 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SPTLC1O15269 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
SPTLC1O15269 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPTLC1O15269 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPTLC1O15269 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPTLC1O15269 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.14■□□□□ 0.65
SPTLC1O15269 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.14■□□□□ 0.65
SPTLC1O15269 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPTLC1O15269 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPTLC1O15269 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPTLC1O15269 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.14■□□□□ 0.65
SPTLC1O15269 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
SPTLC1O15269 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SPTLC1O15269 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.14■□□□□ 0.65
SPTLC1O15269 AC132008.2-207ENST00000454517 770 ntBASIC19.14■□□□□ 0.65
SPTLC1O15269 AC106795.1-205ENST00000512851 1056 ntBASIC19.14■□□□□ 0.65
SPTLC1O15269 AF238378.1-201ENST00000526806 358 ntBASIC19.14■□□□□ 0.65
SPTLC1O15269 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.14■□□□□ 0.65
SPTLC1O15269 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SPTLC1O15269 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
SPTLC1O15269 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPTLC1O15269 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPTLC1O15269 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPTLC1O15269 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPTLC1O15269 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.14■□□□□ 0.65
SPTLC1O15269 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPTLC1O15269 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SPTLC1O15269 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 BICD1-207ENST00000551848 1962 ntBASIC19.13■□□□□ 0.65
SPTLC1O15269 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.13■□□□□ 0.65
SPTLC1O15269 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.13■□□□□ 0.65
SPTLC1O15269 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.13■□□□□ 0.65
SPTLC1O15269 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.13■□□□□ 0.65
SPTLC1O15269 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SPTLC1O15269 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
SPTLC1O15269 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.13■□□□□ 0.65
SPTLC1O15269 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.13■□□□□ 0.65
SPTLC1O15269 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
SPTLC1O15269 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.13■□□□□ 0.65
SPTLC1O15269 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.13■□□□□ 0.65
SPTLC1O15269 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.13■□□□□ 0.65
SPTLC1O15269 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPTLC1O15269 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SPTLC1O15269 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.12■□□□□ 0.65
SPTLC1O15269 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.12■□□□□ 0.65
SPTLC1O15269 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPTLC1O15269 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.12■□□□□ 0.65
SPTLC1O15269 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPTLC1O15269 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPTLC1O15269 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPTLC1O15269 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
SPTLC1O15269 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPTLC1O15269 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SPTLC1O15269 AC010460.3-201ENST00000511359 1579 ntBASIC19.12■□□□□ 0.65
SPTLC1O15269 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SPTLC1O15269 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPTLC1O15269 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.12■□□□□ 0.65
SPTLC1O15269 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPTLC1O15269 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPTLC1O15269 AC007967.3-201ENST00000434308 558 ntBASIC19.12■□□□□ 0.65
SPTLC1O15269 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPTLC1O15269 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPTLC1O15269 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.12■□□□□ 0.65
SPTLC1O15269 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SPTLC1O15269 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.12■□□□□ 0.65
SPTLC1O15269 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SPTLC1O15269 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.12■□□□□ 0.65
SPTLC1O15269 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPTLC1O15269 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.12■□□□□ 0.65
SPTLC1O15269 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPTLC1O15269 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPTLC1O15269 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPTLC1O15269 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPTLC1O15269 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
SPTLC1O15269 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPTLC1O15269 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms