Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCDH17O14917 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDH17O14917 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH17O14917 Z83836.1-201ENST00000624605 1642 ntBASIC17.13■□□□□ 0.33
PCDH17O14917 AC134043.2-201ENST00000624206 2238 ntBASIC17.13■□□□□ 0.33
PCDH17O14917 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCDH17O14917 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDH17O14917 GUSBP12-201ENST00000513727 720 ntBASIC17.12■□□□□ 0.33
PCDH17O14917 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCDH17O14917 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH17O14917 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.12■□□□□ 0.33
PCDH17O14917 AL691432.3-201ENST00000621860 400 ntBASIC17.12■□□□□ 0.33
PCDH17O14917 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDH17O14917 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
PCDH17O14917 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDH17O14917 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.12■□□□□ 0.33
PCDH17O14917 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDH17O14917 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDH17O14917 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH17O14917 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH17O14917 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PCDH17O14917 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDH17O14917 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
PCDH17O14917 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH17O14917 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDH17O14917 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PCDH17O14917 RNF126P1-202ENST00000569893 925 ntBASIC17.11■□□□□ 0.33
PCDH17O14917 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDH17O14917 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDH17O14917 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDH17O14917 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDH17O14917 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PCDH17O14917 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDH17O14917 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PCDH17O14917 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH17O14917 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH17O14917 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH17O14917 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH17O14917 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH17O14917 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH17O14917 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH17O14917 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH17O14917 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH17O14917 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH17O14917 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PCDH17O14917 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH17O14917 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
PCDH17O14917 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH17O14917 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.1■□□□□ 0.33
PCDH17O14917 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH17O14917 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDH17O14917 MIR3652-201ENST00000579335 131 ntBASIC17.1■□□□□ 0.33
PCDH17O14917 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDH17O14917 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms