Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC12.98□□□□□ -0.33
SMIM9A6NGZ8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM9A6NGZ8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SMIM9A6NGZ8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SMIM9A6NGZ8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM9A6NGZ8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM9A6NGZ8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.98□□□□□ -0.33
SMIM9A6NGZ8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC12.98□□□□□ -0.33
SMIM9A6NGZ8 BICD1-207ENST00000551848 1962 ntBASIC12.98□□□□□ -0.33
SMIM9A6NGZ8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC12.98□□□□□ -0.33
SMIM9A6NGZ8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM9A6NGZ8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SMIM9A6NGZ8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SMIM9A6NGZ8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 AC112698.1-201ENST00000510299 916 ntBASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 AP002414.4-201ENST00000589764 1148 ntBASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 AL353801.3-201ENST00000609898 542 ntBASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SMIM9A6NGZ8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 AC132938.6-201ENST00000623828 1655 ntBASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 AC009113.1-201ENST00000570267 2443 ntBASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 NPAP1P7-201ENST00000613027 823 ntBASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SMIM9A6NGZ8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
SMIM9A6NGZ8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SMIM9A6NGZ8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SMIM9A6NGZ8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC12.96□□□□□ -0.34
SMIM9A6NGZ8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
SMIM9A6NGZ8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SMIM9A6NGZ8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.96□□□□□ -0.34
SMIM9A6NGZ8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SMIM9A6NGZ8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SMIM9A6NGZ8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SMIM9A6NGZ8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC12.96□□□□□ -0.34
SMIM9A6NGZ8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.96□□□□□ -0.34
SMIM9A6NGZ8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms