Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
LINC01546A6NGU7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 KRT8P9-201ENST00000558927 1449 ntBASIC12.64□□□□□ -0.39
LINC01546A6NGU7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 AL050303.2-201ENST00000619798 666 ntBASIC12.64□□□□□ -0.39
LINC01546A6NGU7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 AC008894.3-201ENST00000624324 3103 ntBASIC12.64□□□□□ -0.39
LINC01546A6NGU7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01546A6NGU7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 HR-201ENST00000312841 5351 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 LYSMD4-203ENST00000378904 2122 ntBASIC12.63□□□□□ -0.39
LINC01546A6NGU7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 MIR3180-5-201ENST00000583743 153 ntBASIC12.63□□□□□ -0.39
LINC01546A6NGU7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01546A6NGU7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 LINC01311-201ENST00000565162 1445 ntBASIC12.62□□□□□ -0.39
LINC01546A6NGU7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 AC009949.1-201ENST00000623048 1830 ntBASIC12.62□□□□□ -0.39
LINC01546A6NGU7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
LINC01546A6NGU7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms