Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC160A6NGH7 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC160A6NGH7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC160A6NGH7 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 AC099791.1-201ENST00000416440 715 ntBASIC16.66■□□□□ 0.26
CCDC160A6NGH7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.66■□□□□ 0.26
CCDC160A6NGH7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 AL138688.1-201ENST00000624851 1594 ntBASIC16.66■□□□□ 0.26
CCDC160A6NGH7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 AC097376.2-205ENST00000610159 5334 ntBASIC16.66■□□□□ 0.26
CCDC160A6NGH7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC160A6NGH7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 AC026691.1-201ENST00000602502 2017 ntBASIC16.65■□□□□ 0.26
CCDC160A6NGH7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC160A6NGH7 DBET-201ENST00000630918 3363 ntBASIC16.64■□□□□ 0.26
CCDC160A6NGH7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCDC160A6NGH7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.64■□□□□ 0.26
CCDC160A6NGH7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC160A6NGH7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC160A6NGH7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC160A6NGH7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC160A6NGH7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC160A6NGH7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC160A6NGH7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC160A6NGH7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC160A6NGH7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CCDC160A6NGH7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC160A6NGH7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC160A6NGH7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC160A6NGH7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC160A6NGH7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms