Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 AL356309.3-201ENST00000624132 1934 ntBASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 HNRNPDP1-201ENST00000439535 754 ntBASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 SART3-203ENST00000546611 1184 ntBASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TBC1D3FA6NER0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 WIZP1-201ENST00000531444 2299 ntBASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 AC021087.4-201ENST00000563761 564 ntBASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 AC139887.3-201ENST00000568585 713 ntBASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 AL049840.3-201ENST00000602669 611 ntBASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TBC1D3FA6NER0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.78■□□□□ 0.44
TBC1D3FA6NER0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms